RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CAPZBP47756 277 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 CEBPGP53567 150 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 HIST1H3AP68431 136 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 TLE3Q04726 772 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 RAB35Q15286 201 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 ALKBH6Q3KRA9 238 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 C5orf24Q7Z6I8 188 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 ODF3L1Q8IXM7 274 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 ZNF664Q8N3J9 261 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 OR2AJ1Q8NGZ0 328 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 TMEM171Q8WVE6 324 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 MBD3L1Q8WWY6 194 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 ACY3Q96HD9 319 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 GPER1Q99527 375 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 METTL9Q9H1A3 318 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 GSX1Q9H4S2 264 aaPredicted RBP6.9□□□□□ -1.31
VTI1A-202ENST00000432306 SDF2L1Q9HCN8 221 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 IL36GQ9NZH8 169 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 JKAMPQ9P055 326 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 RNF150Q9ULK6 438 aa6.9□□□□□ -1.31
VTI1A-202ENST00000432306 TENM4Q6N022 2769 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 CFAP46Q8IYW2 2715 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 KALRNO60229 2985 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 MPDZO75970 2070 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 IGLV3-32A0A0A0MS00 114 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 PIGBOS1A0A0B4J2F0 54 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 IGSF23A1L1A6 192 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TRDCB7Z8K6 153 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 NPIPA2E9PIF3 369 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TCAPO15273 167 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 NKX2-8O15522 239 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 XRCC2O43543 280 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TRAF3IP2O43734 574 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-202ENST00000432306 SEMA4FO95754 770 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 IL18BPO95998 194 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 AMBPP02760 352 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 GIMD1P0DJR0 217 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 NR2C1P13056 603 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 IER3P46695 156 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 NPBWR2P48146 333 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 BIDP55957 195 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TAS2R30P59541 319 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 UBE2G2P60604 165 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 HLA-DQA1Q5Y7H0 255 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TEX38Q6PEX7 206 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 ZNF100Q8IYN0 542 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 OR5D13Q8NGL4 314 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 IL22RA2Q969J5 263 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 ADGRG7Q96K78 797 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 LYZL4Q96KX0 146 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 OR8D2Q9GZM6 311 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TMEM222Q9H0R3 208 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TCEAL2Q9H3H9 227 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-202ENST00000432306 ZNF701Q9NV72 531 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-202ENST00000432306 MED29Q9NX70 200 aa6.89□□□□□ -1.31
VTI1A-202ENST00000432306 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 A0A0U1RRA0 63 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 C17orf51A8MQB3 221 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 IFNL4K9M1U5 179 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 DUX1O43812 170 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 PRKNO60260 465 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-202ENST00000432306 TYMSP04818 313 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
VTI1A-202ENST00000432306 SLC25A6P12236 298 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 PNLIPP16233 465 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 KLK2P20151 261 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 FKBP2P26885 142 aaKnown RBP6.88□□□□□ -1.31
VTI1A-202ENST00000432306 CD200P41217 278 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-202ENST00000432306 GAGE1Q13065 139 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 SLC10A1Q14973 349 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 HLA-BQ31612 363 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 ABCA11PQ4W5N1 156 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 C6orf201Q7Z4U5 140 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 PRR22Q8IZ63 422 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 SLC22A18ASQ8N1D0 253 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 SLC35G3Q8N808 338 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 CYYR1Q96J86 154 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 SIGLEC12Q96PQ1 595 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 DUX5Q96PT3 197 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 RAB40CQ96S21 281 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 PSMG3Q9BT73 122 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-202ENST00000432306 PLEKHJ1Q9NW61 149 aa6.88□□□□□ -1.31
VTI1A-202ENST00000432306 SPTY2D1-AS1A0A0U1RR47 76 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 PPP5D1E7EU14 171 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 TMEM225BP0DP42 221 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 BCL2P10415 239 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 VPREB1P12018 145 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 CTSEP14091 401 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 ANOS1P23352 680 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 NMSQ5H8A3 153 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 C10orf128Q5T292 105 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 CCDC144NLQ6NUI1 221 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 DHRS13Q6UX07 377 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 Q6ZS46 218 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 Q6ZSR6 202 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 PPP1R32Q7Z5V6 425 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 TGIF2LXQ8IUE1 241 aa6.87□□□□□ -1.31
VTI1A-202ENST00000432306 ZDHHC23Q8IYP9 409 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms