RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 PTGDSP41222 190 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 CSN1S1P47710 185 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 RPS4XP62701 263 aaKnown RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 FOXE3Q13461 319 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 SH2D6Q7Z4S9 175 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 PPP1R27Q86WC6 154 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 HOGA1Q86XE5 327 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 GATD1Q8NB37 220 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 PYURFQ96I23 114 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 DEFB129Q9H1M3 183 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 SCN5AQ14524 2016 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 ROBO1Q9Y6N7 1651 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 G3V2L1 256 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 DUSP11O75319 330 aaKnown RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 LYZL6O75951 148 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 C1RP00736 705 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 RPL27P61353 136 aaKnown RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 SLC38A11Q08AI6 406 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 PDGFRLQ15198 375 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 ENTPD8Q5MY95 495 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM25Q86YD3 366 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 EXOC3-AS1Q8N2X6 119 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 OR10S1Q8NGN2 331 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 OR8S1Q8NH09 359 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 OR4X1Q8NH49 305 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 LMO3Q8TAP4 145 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM125Q96AQ2 219 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 RBMXL1Q96E39 390 aaKnown RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 AP5S1Q9NUS5 200 aa4.58□□□□□ -1.68
PTPN4-203ENST00000430976 CHD2O14647 1828 aaKnown RBP4.58□□□□□ -1.68
PTPN4-203ENST00000430976 TET3O43151 1660 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 A0A087WWL8 130 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 RENP00797 406 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 TNFSF9P41273 254 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 ZFP36L2P47974 494 aaKnown RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 NDUFV3P56181 108 aaKnown RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 FABP5Q01469 135 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CBLL1Q75N03 491 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SLC25A40Q8TBP6 338 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 RASL10BQ96S79 203 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 JPT2Q9H910 190 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SDR39U1Q9NRG7 319 aaPredicted RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 PILRAQ9UKJ1 303 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 RARRES3Q9UL19 164 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SIT1Q9Y3P8 196 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CEP152O94986 1710 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 ATP7AQ04656 1500 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 BORCS7-ASMTA0A0B4J1R7 106 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 LOC285095A0A1B0GVY8 99 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CDC14CA4D256 554 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 WNT1P04628 370 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CLDN15P56746 228 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 MORN2Q502X0 79 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 IBA57Q5T440 356 aaKnown RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SPRYD7Q5W111 196 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 TXNDC8Q6A555 127 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 FBXW12Q6X9E4 464 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 TVP23CQ96ET8 276 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 KCNE5Q9UJ90 142 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 A2MP01023 1474 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 USP17L23D6RBM5 183 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CCL21O00585 134 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SLC17A2O00624 439 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CHEK1O14757 476 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF728P0DKX0 622 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 WASP42768 502 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 TAS2R45P59539 299 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 PPP1CBP62140 327 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 Q56UQ5 140 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 GLYATL3Q5SZD4 288 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 KDM4DQ6B0I6 523 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 BCDIN3DQ7Z5W3 292 aaKnown RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 COX18Q8N8Q8 333 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 BORCS8Q96FH0 119 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 C20orf78Q9BR46 151 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 APOBEC3GQ9HC16 384 aaKnown RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SIGLEC7Q9Y286 467 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF257Q9Y2Q1 563 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SEC16AO15027 2179 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 A0A1W2PS29 197 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 FAM24AA6NFZ4 105 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 TMEM262E9PQX1 116 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 TIMM23O14925 209 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 MLNRO43193 412 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 DHHO43323 396 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 H2BFMP0C1H6 154 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 IGLC2P0DOY2 106 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 IGLC3P0DOY3 106 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 UNGP13051 313 aaPredicted RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 DUTP33316 252 aaKnown RBP4.57□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF134P52741 427 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 HERVK_113P63121 156 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 INSL4Q14641 139 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 OR1C1Q15619 314 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 SFTA2Q6UW10 78 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 C16orf82Q7Z2V1 217 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 PPP1R32Q7Z5V6 425 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 CEACAM19Q7Z692 300 aa4.57□□□□□ -1.68
PTPN4-203ENST00000430976 LRTM2Q8N967 370 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms