RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 IGHMP01871 453 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 MEF2BQ02080 365 aaPredicted RBP12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 CARD17Q5XLA6 110 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 OR4S2Q8NH73 311 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 PTGER4P35408 488 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 THBS3P49746 956 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 HBG1P69891 147 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 HBG2P69892 147 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 EIF3IQ13347 325 aaKnown RBP12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 FAM57BQ71RH2 274 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 FBXL14Q8N1E6 418 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 RALYQ9UKM9 306 aaKnown RBP12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 SAP30O75446 220 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 IL3RAP26951 378 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 C1QL3Q5VWW1 255 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 LSRQ86X29 649 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 C11orf40Q8WZ69 217 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 ARHGAP5-AS1Q96IT6 56 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 WDR61Q9GZS3 305 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 TUBD1Q9UJT1 453 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 OR2T8A6NH00 312 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 MMP23AO75900 390 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 HLA-DOBP13765 273 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 FOXL2P58012 376 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 SPSB3Q6PJ21 355 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 ZNF519Q8TB69 540 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 OR51E1Q8TCB6 317 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 RNF133Q8WVZ7 376 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 ASB10Q8WXI3 467 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 MRPL18Q9H0U6 180 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 NAA60Q9H7X0 242 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 PLSCR4Q9NRQ2 329 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 H3BP45 60 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 CNIH1O95406 144 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 MT-CO3P00414 261 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 RPS18P62269 152 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 FHL1Q13642 323 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 DPF1Q92782 380 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 NEIL1Q96FI4 390 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 NRN1Q9NPD7 142 aa12.45□□□□□ -0.42
SYNGAP1-203ENST00000428982 ALPK2Q86TB3 2170 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 SNURFLB1AK76 121 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 ADMP35318 185 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 CRYBA4P53673 196 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 FAM90A2PQ658T7 463 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 DHRS13Q6UX07 377 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 RTBDNQ9BSG5 229 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 LRRC10Q5BKY1 277 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 SAXO1Q8IYX7 474 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 OR1B1Q8NGR6 318 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 CNTRLQ7Z7A1 2325 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 STAG3L2P0CL84 134 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 AZU1P20160 251 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 IER3P46695 156 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 AMELYQ99218 206 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 B4GALT7Q9UBV7 327 aa12.44□□□□□ -0.42
SYNGAP1-203ENST00000428982 NPIPB13A6NJU9 1138 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 NPIPB4C9JG80 1138 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 C8orf44Q96CB5 159 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 SFRP2Q96HF1 295 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 TMEM252Q8N6L7 170 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 GJC3Q8NFK1 279 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 ZNF703Q9H7S9 590 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 PLA2G3Q9NZ20 509 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 SELENOKQ9Y6D0 94 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 ZNF816-ZNF321PA0A0X1KG74 233 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 C17orf112F2Z3M2 114 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 SUPT4H1P63272 117 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 LTC4SQ16873 150 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 KRTCAP3Q53RY4 240 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 TSPO2Q5TGU0 170 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 C9orf40Q8IXQ3 194 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 RSG1Q9BU20 258 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 NECAP2Q9NVZ3 263 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 OCIAD1Q9NX40 245 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 RFNGQ9Y644 331 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 DOCK9Q9BZ29 2069 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 SOCS1O15524 211 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 RHBDL1O75783 438 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 VSIG8P0DPA2 414 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 EGR4Q05215 589 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 TRIP6Q15654 476 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 FAM71F2Q6NXP2 309 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 OR2M7Q8NG81 312 aa12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 ZNF501Q96CX3 271 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-203ENST00000428982 H0Y8G0 127 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 LILRA1O75019 489 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 SCGB1A1P11684 91 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 CBLN1P23435 193 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 LMO1P25800 156 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 MPV17L2Q567V2 206 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 OR2V1Q8NHB1 315 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 CALHM2Q9HA72 323 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 A6NDN8 102 aa12.42□□□□□ -0.42
SYNGAP1-203ENST00000428982 PRR32B1ATL7 298 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms