RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CTXN2P0C2S0 81 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 FAHP16930 419 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ZNF20P17024 532 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TSPOP30536 169 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 C1orf53Q5VUE5 145 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TMEM123Q8N131 208 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TECTBQ96PL2 329 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 FBRSQ9HAH7 460 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TRBV23OR9-2A0A075B6M9 112 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 MT-ND6P03923 174 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 TFPI2P48307 235 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 PRRX1P54821 245 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 RRADP55042 308 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 SSX7Q7RTT5 188 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 GPR146Q96CH1 333 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 FOXN4Q96NZ1 517 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 VAMP8Q9BV40 100 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 LY96Q9Y6Y9 160 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 UBR5O95071 2799 aaPredicted RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1-12A0A0C4DH73 117 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 A0A1W2PP55 124 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 CEBPZOSA8MTT3 80 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 SLC33A1O00400 549 aaPredicted RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1D-12P01611 117 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 CD38P28907 300 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 RAB7AP51149 207 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 PPP1CBP62140 327 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 C17orf82Q86X59 251 aaPredicted RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 TMEM217Q8N7C4 229 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 A0A1B0GV50 99 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 TCEAL5Q5H9L2 206 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 SLC7A10Q9NS82 523 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 PMS2P5A8MQ11 134 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 CTSBP07858 339 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 GIMD1P0DJR0 217 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 MRPS34P82930 218 aaKnown RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 FAM27BQ5VT28 67 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 FAM69BQ5VUD6 431 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 KLHDC1Q8N7A1 406 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 NEIL1Q96FI4 390 aaPredicted RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 LYZL4Q96KX0 146 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 EMC6Q9BV81 110 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 TBL2Q9Y4P3 447 aaKnown RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 UTP20O75691 2785 aaKnown RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 OR2J2O76002 312 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 SERPINA7P05543 415 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 EFNA3P52797 238 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 IGFBP7Q16270 282 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 KIAA0895LQ68EN5 471 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 FAM71F2Q6NXP2 309 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 COLCA1Q6ZS62 124 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 OR5AU1Q8NGC0 362 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 CSMD2Q7Z408 3487 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1-27A0A075B6S5 117 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 C17orf51A8MQB3 221 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 SYNGR2O43760 224 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 ZNF253O75346 499 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 ZNF737O75373 536 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 CNOT4O95628 575 aaKnown RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 MYBPHQ13203 477 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 OR8G2PQ6IF36 304 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 TIPARPQ7Z3E1 657 aaKnown RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 C11orf42Q8N5U0 333 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 GATSQ8NAP1 163 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 OR10G3Q8NGC4 313 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 SPPL3Q8TCT6 385 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 PSMF1Q92530 271 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 TMEM204Q9BSN7 226 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 ZNF701Q9NV72 531 aaPredicted RBP4.37□□□□□ -1.71
RIF1-203ENST00000428287 ALKBH4Q9NXW9 302 aa4.37□□□□□ -1.71
RIF1-203ENST00000428287 A0A0G2JRQ6 117 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 C5orf63A6NC05 138 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SHISA7A6NL88 538 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 DKK1O94907 266 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 IFNA1P01562 189 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 OR6C1Q96RD1 312 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 OR51I2Q9H344 312 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 CRYGSP22914 178 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 PSG4Q00888 419 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ABCA11PQ4W5N1 156 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 CALHM1Q8IU99 346 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 WWTR1Q9GZV5 400 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 KIR2DS1A0A191URI9 304 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 A0A1B0GUS0 222 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 CRISP2P16562 243 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 KIR2DS4P43632 304 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 REG1BP48304 166 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 CX3CL1P78423 397 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 KIR2DS1Q14954 304 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ADIRFQ15847 76 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SELENOHQ8IZQ5 122 aaKnown RBP4.36□□□□□ -1.71
RIF1-203ENST00000428287 IGHV2-26A0A0B4J1V2 119 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 EFNA2O43921 213 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 PDE6DO43924 150 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ACRP10323 421 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ARG2P78540 354 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 LCN15Q6UWW0 184 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 TBC1D26Q86UD7 250 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms