RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 DYNC2LI1Q8TCX1 351 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 RTN4IP1Q8WWV3 396 aaPredicted RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 KCTD12Q96CX2 325 aaKnown RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 NOL4LQ96MY1 436 aaPredicted RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 BCL7BQ9BQE9 202 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 Q9N2K0 584 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 OR2S2Q9NQN1 319 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 GNG12Q9UBI6 72 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 ZNF230Q9UIE0 474 aaPredicted RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 TRBV6-6A0A0A6YYG2 114 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 SPINT2O43291 252 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 F2RL1P55085 397 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 CCDC144NLQ6NUI1 221 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 C18orf65Q6ZTR6 163 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 CENPVQ7Z7K6 275 aaPredicted RBP10.08□□□□□ -0.8
GPC1-204ENST00000426280 ZNF329Q86UD4 541 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 Q8N9W7 124 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 NUDCD2Q8WVJ2 157 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 PHF21AQ96BD5 680 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 ABCG5Q9H222 651 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 C12orf4Q9NQ89 552 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.08□□□□□ -0.8
GPC1-204ENST00000426280 KCNIP1Q9NZI2 227 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
GPC1-204ENST00000426280 IGKV1D-8A0A087WSZ0 117 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 SSX5O60225 188 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 PRB2P02812 416 aaPredicted RBP10.07□□□□□ -0.8
GPC1-204ENST00000426280 OPN1MWP04001 364 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 FCGR3AP08637 254 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 SCTP09683 121 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 OPN1MW2P0DN77 364 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 OPN1MW3P0DN78 364 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 ELK1P19419 428 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 OR3A3P47888 321 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 ZNF137PP52743 207 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 HLA-DRB3P79483 266 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 HACD4Q5VWC8 232 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 TRAT1Q6PIZ9 186 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 NDUFA11Q86Y39 141 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 IL1F10Q8WWZ1 152 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 ACOT12Q8WYK0 555 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 S100A16Q96FQ6 103 aaKnown RBP10.07□□□□□ -0.8
GPC1-204ENST00000426280 RIMS4Q9H426 269 aaPredicted RBP10.07□□□□□ -0.8
GPC1-204ENST00000426280 DIABLOQ9NR28 239 aa10.07□□□□□ -0.8
GPC1-204ENST00000426280 RSL24D1Q9UHA3 163 aaKnown RBP10.07□□□□□ -0.8
GPC1-204ENST00000426280 IGKV1-6A0A0C4DH72 117 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 DPPA5A6NC42 116 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 SERPINE3A8MV23 424 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 CTDSP2O14595 271 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 PROP1O75360 226 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 PEX14O75381 377 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 SCGNO76038 276 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 FCER2P06734 321 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
GPC1-204ENST00000426280 CNTFRP26992 372 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 TALDO1P37837 337 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 ARHGDIBP52566 201 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 TAS2R20P59543 309 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 MRPS15P82914 257 aaKnown RBP10.06□□□□□ -0.8
GPC1-204ENST00000426280 Q3ZCU0 254 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 PDLIM3Q53GG5 364 aaPredicted RBP10.06□□□□□ -0.8
GPC1-204ENST00000426280 OXLD1Q5BKU9 147 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 MZT2AQ6P582 158 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 MOB1BQ7L9L4 216 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 R3HDM4Q96D70 268 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 ZNF251Q9BRH9 671 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 DCUN1D5Q9BTE7 237 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 MIXL1Q9H2W2 232 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 AUNIPQ9H7T9 357 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 OR1A1Q9P1Q5 309 aa10.06□□□□□ -0.8
GPC1-204ENST00000426280 A0A0A6YYH2 397 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 TCRBV4S1A1TA0A5B7 111 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 MEIS3P1A6NDR6 274 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 A6NJ64 397 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 FAM25AB3EWG3 89 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 FAM25CB3EWG5 89 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 FAM25GB3EWG6 89 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 TRDCB7Z8K6 153 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 ST8SIA5O15466 376 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 XRCC3O43542 346 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 YPEL1O60688 119 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 APOA1P02647 267 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 GSTT2P0CG29 244 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 GSTT2BP0CG30 244 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 CD1BP29016 333 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 SOX6P35712 828 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 LINC00205P59089 165 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 GNG2P59768 71 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 HTD2P86397 168 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 ARL6IP1Q15041 203 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 PNLIPRP3Q17RR3 467 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 BEAN1Q3B7T3 259 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 TMEM69Q5SWH9 247 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 FOXB2Q5VYV0 432 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 LCNL1Q6ZST4 164 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 ZNF554Q86TJ5 538 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 TGIF2LXQ8IUE1 241 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 AP3S1Q92572 193 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 GALMQ96C23 342 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms