RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SELEP16581 610 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 OR2T2Q6IF00 324 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 TMPRSS7Q7RTY8 843 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 PLPPR1Q8TBJ4 325 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 NANOS1Q8WY41 292 aaKnown RBP11.05□□□□□ -0.64
COL12A1-205ENST00000425443 TMEM222Q9H0R3 208 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 RBM7Q9Y580 266 aaKnown RBP11.05□□□□□ -0.64
COL12A1-205ENST00000425443 MED12LQ86YW9 2145 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 TRGV5A0A0B4J1U4 118 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 SLC22A20A6NK97 555 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 M0QZK8 103 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 CD82P27701 267 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 RND3P61587 244 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 OR5A2Q8NGI9 324 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 POM121L2Q96KW2 1035 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 TMEM9BQ9NQ34 198 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 DOK5Q9P104 306 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 CA6P23280 308 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 PTTG1IPP53801 180 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF154Q13106 437 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 KRTCAP3Q53RY4 240 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 COMMD1Q8N668 190 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 LOXL4Q96JB6 756 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 KIR2DS1A0A191URI9 304 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A10PA6NDY2 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A18PA6NE21 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A16PA6NEW6 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A20PA6NIJ5 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A8PA6NJQ4 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A7PA6NKC0 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A22PA8MWA6 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A12PA8MX19 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A5PA8MXJ8 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A23PA8MXZ1 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A15PP0C7V4 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A13PP0C7W8 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A14PP0C7W9 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM90A24PP0C7X0 464 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 KIR2DS4P43632 304 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 UCP3P55916 312 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 KIR2DS1Q14954 304 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF766Q5HY98 468 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 SP5Q6BEB4 398 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-205ENST00000425443 C11orf42Q8N5U0 333 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 CSTL1Q9H114 145 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 TMED3Q9Y3Q3 217 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 A0A0G2JRQ6 117 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 CXCL1P09341 107 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 IL2RGP31785 369 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 PMELP40967 661 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 DYNLT3P51808 116 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 NHLH1Q02575 133 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 HEPN1Q6WQI6 88 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 C20orf204Q6ZNR8 217 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF573Q86YE8 665 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 CMTM1Q8IZ96 169 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 TMEM252Q8N6L7 170 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 OR1J1Q8NGS3 322 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 FAM216AQ8WUB2 273 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 Q9N2K0 584 aa11.04□□□□□ -0.64
COL12A1-205ENST00000425443 STRAPQ9Y3F4 350 aaKnown RBP11.04□□□□□ -0.64
COL12A1-205ENST00000425443 RBFOX3A6NFN3 312 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 OR2C1O95371 312 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 S100GP29377 79 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 TNFSF10P50591 281 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 GNG3P63215 75 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 SRPXP78539 464 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 HOXA4Q00056 320 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-205ENST00000425443 RHEBQ15382 184 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 MPV17LQ2QL34 196 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 SAXO1Q8IYX7 474 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 SUMF2Q8NBJ7 301 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 BEND2Q8NDZ0 799 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 ARHGAP21Q5T5U3 1957 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 CHST1O43916 411 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 TMEM267Q0VDI3 215 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-205ENST00000425443 SOHLH1Q5JUK2 328 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 PLA2G2CQ5R387 149 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 USF3Q68DE3 2245 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 MDP1Q86V88 176 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF295-AS1Q8N0V1 137 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 TMEM178AQ8NBL3 297 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 MUCL1Q96DR8 90 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 LPAR2Q9HBW0 351 aa11.03□□□□□ -0.64
COL12A1-205ENST00000425443 C20orf202A1L168 122 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 H3BQ15 152 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 IFNA17P01571 189 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 OPN1MWP04001 364 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 METTL15P1P0C7V9 234 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 OPN1MW2P0DN77 364 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 OPN1MW3P0DN78 364 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.64
COL12A1-205ENST00000425443 NOL4LQ96MY1 436 aaPredicted RBP11.02□□□□□ -0.64
COL12A1-205ENST00000425443 PLK3Q9H4B4 646 aa11.02□□□□□ -0.64
COL12A1-205ENST00000425443 DCHS1Q96JQ0 3298 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 RHBDL1O75783 438 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 PTBP3O95758 552 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms