RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 GAPDHP04406 335 aaKnown RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 SLC2A2P11168 524 aaPredicted RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 PYCR1P32322 319 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 BMI1P35226 326 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 NPBWR2P48146 333 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 CNN1P51911 297 aaKnown RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 BLVRAP53004 296 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 SELENOWP63302 87 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 RIPPLY1Q0D2K3 151 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 CYBRD1Q53TN4 286 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 DLEU7Q6UYE1 221 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 LINC00322Q6ZN03 302 aaPredicted RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 GPR141Q7Z602 305 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 LAX1Q8IWV1 398 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 ENTHD1Q8IYW4 607 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 DEFB125Q8N687 156 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 EIF1ADQ8N9N8 165 aaKnown RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF114Q8NC26 417 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 OR51L1Q8NGJ5 315 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 OR9G4Q8NGQ1 327 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 OR6K6Q8NGW6 343 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 OR4A16Q8NH70 328 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 FANK1Q8TC84 345 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 RFT1Q96AA3 541 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 OR52B2Q96RD2 323 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 S1PR3Q99500 378 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 CGREF1Q99674 301 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 SPAG8Q99932 426 aaPredicted RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 SH3GL1Q99961 368 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 HSPB9Q9BQS6 159 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 OVOL2Q9BRP0 275 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 FGF23Q9GZV9 251 aaPredicted RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 KAT8Q9H7Z6 458 aaKnown RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 HES4Q9HCC6 221 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 DCAF13Q9NV06 445 aaKnown RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 PTTG2Q9NZH5 202 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 NDUFA13Q9P0J0 144 aa3.62□□□□□ -1.83
SFXN1-202ENST00000421887 RRP15Q9Y3B9 282 aaKnown RBP3.62□□□□□ -1.83
SFXN1-202ENST00000421887 IGHV3-72A0A0B4J1Y9 119 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 TRAV41A0A0B4J266 112 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 A0A1W2PN81 502 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF729A6NN14 1252 aaPredicted RBP3.61□□□□□ -1.83
SFXN1-202ENST00000421887 C16orf90A8MZG2 172 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 G3V318 75 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 CXCR6O00574 342 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 HSD17B6O14756 317 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ARPC3O15145 178 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 MAGEB3O15480 346 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 IDH3BO43837 385 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 HAND1O96004 215 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 MOSP00540 346 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 IGHV3-11P01762 117 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 IGHV3-7P01780 117 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 RBMY1A1P0DJD3 496 aaKnown RBP3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ERP29P30040 261 aaKnown RBP3.61□□□□□ -1.83
SFXN1-202ENST00000421887 CHRNA7P36544 502 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 NKX2-1P43699 371 aaPredicted RBP3.61□□□□□ -1.83
SFXN1-202ENST00000421887 GNG10P50151 68 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 CRYBA2P53672 197 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF45Q02386 682 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 RAB40BQ12829 278 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 KIAA0141Q14154 515 aaPredicted RBP3.61□□□□□ -1.83
SFXN1-202ENST00000421887 EBI3Q14213 229 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 AGKQ53H12 422 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 SOHLH1Q5JUK2 328 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 SLC25A24Q6NUK1 477 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ERICH5Q6P6B1 374 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF497Q6ZNH5 498 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ASRGL1Q7L266 308 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 SLC16A13Q7RTY0 426 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF554Q86TJ5 538 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 FUNDC1Q8IVP5 155 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 RDH10Q8IZV5 341 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF565Q8N9K5 539 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 OR6N2Q8NGY6 317 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 THRSPQ92748 146 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 EMG1Q92979 244 aaKnown RBP3.61□□□□□ -1.83
SFXN1-202ENST00000421887 CEP19Q96LK0 163 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 MFFQ9GZY8 342 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 OR52D1Q9H346 318 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 RIBC2Q9H4K1 309 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ANKRD19PQ9H560 264 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 PARP11Q9NR21 331 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF355PQ9NSJ1 428 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF319Q9P2F9 582 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 CD300AQ9UGN4 299 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 FAM32AQ9Y421 112 aaKnown RBP3.61□□□□□ -1.83
SFXN1-202ENST00000421887 U3KQV3 271 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 ALMS1Q8TCU4 4167 aa3.61□□□□□ -1.83
SFXN1-202ENST00000421887 LOC102724200A0A096LPH7 203 aaPredicted RBP3.6□□□□□ -1.83
SFXN1-202ENST00000421887 IGLL5B9A064 214 aa3.6□□□□□ -1.83
SFXN1-202ENST00000421887 E5RGE8 158 aa3.6□□□□□ -1.83
SFXN1-202ENST00000421887 ATP6V0E1O15342 81 aa3.6□□□□□ -1.83
SFXN1-202ENST00000421887 CYB5AP00167 134 aa3.6□□□□□ -1.83
SFXN1-202ENST00000421887 REG1BP48304 166 aa3.6□□□□□ -1.83
SFXN1-202ENST00000421887 TPPP2P59282 170 aa3.6□□□□□ -1.83
SFXN1-202ENST00000421887 CDC42P60953 191 aa3.6□□□□□ -1.83
SFXN1-202ENST00000421887 EWSR1Q01844 656 aaKnown RBP eCLIP3.6□□□□□ -1.83
SFXN1-202ENST00000421887 RELQ04864 619 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms