RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 C11orf1Q9H5F2 150 aa11.32□□□□□ -0.6
SFTPA1-202ENST00000419470 LPAR2Q9HBW0 351 aa11.32□□□□□ -0.6
SFTPA1-202ENST00000419470 ZNF701Q9NV72 531 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-202ENST00000419470 SLC7A11Q9UPY5 501 aa11.32□□□□□ -0.6
SFTPA1-202ENST00000419470 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
SFTPA1-202ENST00000419470 SHANK1Q9Y566 2161 aa11.32□□□□□ -0.6
SFTPA1-202ENST00000419470 POLEQ07864 2286 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 ZNF503-AS2A6NEH8 195 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 F5H5K5 113 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 OR10J1P30954 320 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 SP6Q3SY56 376 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 DOLPP1Q86YN1 238 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 CMTM1Q8IZ96 169 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 LGI3Q8N145 548 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 STARD4Q96DR4 205 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 ZNF319Q9P2F9 582 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 PCNX1Q96RV3 2341 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 M0R135 149 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 PRRG2O14669 202 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 CGAP01215 116 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 HLA-HP01893 362 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 IGHV1-2P23083 117 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 BLVRBP30043 206 aaPredicted RBP11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 BRS3P32247 399 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 VAMP2P63027 116 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 ABCA11PQ4W5N1 156 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 ZNF705AQ6ZN79 300 aaPredicted RBP11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 OR8B12Q8NGG6 310 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 SPTSSAQ969W0 71 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 DIRC2Q96SL1 478 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 GPER1Q99527 375 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 PLEKHF2Q9H8W4 249 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 NAGKQ9UJ70 344 aa11.31□□□□□ -0.6
SFTPA1-202ENST00000419470 IGSF23A1L1A6 192 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 FAM24AA6NFZ4 105 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 BCL2P10415 239 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 CEACAM8P31997 349 aaPredicted RBP11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 PRDX4Q13162 271 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 H1FOOQ8IZA3 346 aaPredicted RBP11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 GBGT1Q8N5D6 347 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 CPEB3Q8NE35 698 aaKnown RBP11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 NBEAQ8NFP9 2946 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 TMEM171Q8WVE6 324 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 REEP6Q96HR9 211 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 P2RX4Q99571 388 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 GNG13Q9P2W3 67 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 LAMP3Q9UQV4 416 aa11.3□□□□□ -0.6
SFTPA1-202ENST00000419470 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 E9PLN8 166 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 ZNF728P0DKX0 622 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 COX5AP20674 150 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 TGFBR3Q03167 851 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 FAM57BQ71RH2 274 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 MSI2Q96DH6 328 aaKnown RBP11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 PRR14LQ5THK1 2151 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 FAM221AA4D161 298 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 C5orf63A6NC05 138 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 HPRT1P00492 218 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 GLI4P10075 376 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 IRF2P14316 349 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 IDH3GP51553 393 aaPredicted RBP11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 ACTL10Q5JWF8 245 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 SSC4DQ8WTU2 575 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 GAL3ST2Q9H3Q3 398 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 LYRM2Q9NU23 88 aaPredicted RBP11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 ANXA10Q9UJ72 324 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 PROCRQ9UNN8 238 aa11.29□□□□□ -0.6
SFTPA1-202ENST00000419470 CDS2O95674 445 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 IGLV3-1P01715 115 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 CCL1P22362 96 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 ARR3P36575 388 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 RPP30P78346 268 aaKnown RBP11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 OR51G1Q8NGK1 321 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 OR5C1Q8NGR4 320 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 MIEN1Q9BRT3 115 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 Q9N2K0 584 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 NBASA2RRP1 2371 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 A0A0U1RQV5 110 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 SIAH2O43255 324 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 LYZL6O75951 148 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 MTCP1P56278 107 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 BAXQ07812 192 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 GABRA6Q16445 453 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 WDR25Q64LD2 544 aaPredicted RBP11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 MYO7BQ6PIF6 2116 aa11.28□□□□□ -0.6
SFTPA1-202ENST00000419470 TMEM252Q8N6L7 170 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms