RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TMEM186Q96B77 213 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 CCL19Q99731 98 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 PARP11Q9NR21 331 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 HIGD1AQ9Y241 93 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 UMODP07911 640 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 TMEM222Q9H0R3 208 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 ZNF552Q9H707 407 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-202ENST00000413872 A0A1W2PS18 150 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 ZIC3O60481 467 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 HOXA4Q00056 320 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-202ENST00000413872 GAMTQ14353 236 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 BSXQ3C1V8 233 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 NEU4Q8WWR8 484 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-202ENST00000413872 METTL1Q9UBP6 276 aaKnown RBP14.85□□□□□ -0.03
PHRF1-202ENST00000413872 RABAC1Q9UI14 185 aa14.85□□□□□ -0.03
PHRF1-202ENST00000413872 HYPMO75409 117 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 FCER1GP30273 86 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 LOXL3P58215 753 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 HSD17B13Q7Z5P4 300 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 Q96M66 194 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 P2RX4Q99571 388 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 RALYQ9UKM9 306 aaKnown RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 PITX3O75364 302 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 CYB5R3P00387 301 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 MMP7P09237 267 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 SCTP09683 121 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 AMTP48728 403 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 SERF2P84101 59 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 RBPMS2Q6ZRY4 209 aaKnown RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 OTOFQ9HC10 1997 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 A0A1W2PP11 408 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 C7orf66A4D0T2 115 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 NTN3O00634 580 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 FAM87AP0C7U9 286 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 CFHR1Q03591 330 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 ANAPC16Q96DE5 110 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 ST6GAL2Q96JF0 529 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 AKIRIN1Q9H9L7 192 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 ARL2-SNX15V9GYD0 113 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 C9orf172C9J069 976 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 FAM90A26D6RGX4 464 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 SUCLG1P53597 346 aaKnown RBP14.84□□□□□ -0.03
PHRF1-202ENST00000413872 AQP3Q92482 292 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 GPR132Q9UNW8 380 aa14.84□□□□□ -0.03
PHRF1-202ENST00000413872 CD1BP29016 333 aa14.83□□□□□ -0.03
PHRF1-202ENST00000413872 MOGAT2Q3SYC2 334 aa14.83□□□□□ -0.03
PHRF1-202ENST00000413872 TGFBR3LH3BV60 316 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 KLF4O43474 513 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 SUMO1P63165 101 aaKnown RBP14.83□□□□□ -0.04
PHRF1-202ENST00000413872 FAM222BQ8WU58 562 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 OR5P3Q8WZ94 311 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 CLEC7AQ9BXN2 247 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 USF1P22415 310 aaPredicted RBP14.83□□□□□ -0.04
PHRF1-202ENST00000413872 PRSS3P2Q8NHM4 247 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 RSRP1Q9BUV0 290 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 CKAP5Q14008 2032 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 DNM1P46Q6ZS02 220 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 C5orf17Q8NAS9 161 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 OR4A5Q8NH83 315 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 TOLLIPQ9H0E2 274 aa14.83□□□□□ -0.04
PHRF1-202ENST00000413872 B4DEV8 164 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 CELA3AP09093 270 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 CXCL3P19876 107 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 CD40P25942 277 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 C16orf82Q7Z2V1 217 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 STPG3Q8N7X2 389 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 CLRN3Q8NCR9 226 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 OR10G8Q8NGN5 311 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 SEC11CQ9BY50 192 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 ICE1Q9Y2F5 2266 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 ABCA7Q8IZY2 2146 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 P01737 135 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 RANP62826 216 aaKnown RBP14.82□□□□□ -0.04
PHRF1-202ENST00000413872 CHODLQ9H9P2 273 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 ACSF3Q4G176 576 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-202ENST00000413872 PIKFYVEQ9Y2I7 2098 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 FCN1O00602 326 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 COL8A1P27658 744 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 CD300CQ08708 224 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 RIGQ13278 110 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 ABHD12Q8N2K0 398 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 LINC01560Q8TB33 94 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 NIT2Q9NQR4 276 aa14.82□□□□□ -0.04
PHRF1-202ENST00000413872 PF4V1P10720 104 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 CD59P13987 128 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 UBE2V2Q15819 145 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 RNF212Q495C1 297 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 SLC35E4Q6ICL7 350 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 VWA1Q6PCB0 445 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 TMEM204Q9BSN7 226 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 DICER1Q9UPY3 1922 aaKnown RBP14.81□□□□□ -0.04
PHRF1-202ENST00000413872 CEACAM18A8MTB9 384 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 CFDP00746 253 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-202ENST00000413872 LCTP09848 1927 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 LGALSLQ3ZCW2 172 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-202ENST00000413872 IL22RA2Q969J5 263 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 MEGF10Q96KG7 1140 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 GUCD1Q96NT3 240 aa14.81□□□□□ -0.04
PHRF1-202ENST00000413872 CECR9P0C854 216 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms