RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OR2C3Q8N628 320 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 GP6Q9HCN6 339 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 TMEFF2Q9UIK5 374 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 CDC42EP2O14613 210 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 NUDT10Q8NFP7 164 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 NUDT11Q96G61 164 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 F11RQ9Y624 299 aaKnown RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 TCRBV4S1A1TA0A5B7 111 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 HMX2A2RU54 273 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 LEUTXA8MZ59 168 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 PGA3P0DJD8 388 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 ISL1P61371 349 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 MBNL2Q5VZF2 373 aaKnown RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 SNRPD3P62318 126 aaKnown RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 MESP2Q0VG99 397 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 ASAH1Q13510 395 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 STHQ8IWL8 128 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 LINC01465Q8N7H1 131 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 ADAT3Q96EY9 351 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 ADTRPQ96IZ2 230 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 PILRBQ9UKJ0 227 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 SPTBN1Q01082 2364 aaKnown RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 HBZP02008 142 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 LILRA6Q6PI73 481 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 UQCC2Q9BRT2 126 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 GEMIN7Q9H840 131 aaKnown RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 APCSP02743 223 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 CD69Q07108 199 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 FAM214BQ7L5A3 538 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 ELOVL1Q9BW60 279 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 SSBP3Q9BWW4 388 aaPredicted RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 SOX21Q9Y651 276 aaPredicted RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 RPL27AP46776 148 aaKnown RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 GTSCR1Q86UQ5 136 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 FREM3P0C091 2139 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 CST2P09228 141 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 MDKP21741 143 aaPredicted RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 CKS2P33552 79 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 WNT10AQ9GZT5 417 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 OR2A4O95047 310 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 GZMHP20718 246 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 HLA-DRB3P79483 266 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 C2orf83Q53S99 150 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 C10orf111Q8N326 155 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 SLC25A45Q8N413 288 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 C17orf47Q8NEP4 570 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 LRRC3BQ96PB8 259 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 OR2A7Q96R45 310 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 ABCA4P78363 2273 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 VN1R4Q7Z5H5 301 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 CALYQ9NYX4 217 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 FOXI3A8MTJ6 420 aaPredicted RBP7.29□□□□□ -1.24
SCN9A-203ENST00000409672 BCL2L11O43521 198 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 ZNF253O75346 499 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 RND2P52198 227 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 DHRS2Q13268 280 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 IGSF11Q5DX21 431 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 FOXB2Q5VYV0 432 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 LYZL2Q7Z4W2 148 aa7.29□□□□□ -1.24
SCN9A-203ENST00000409672 PRR33A8MZF0 331 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SNURFLB1AK76 121 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 VDAC2P45880 294 aaPredicted RBP7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SNAI3Q3KNW1 292 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 MAPK1IP1LQ8NDC0 245 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 ISOC2Q96AB3 205 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 NAT8Q9UHE5 227 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 TUBGCP6Q96RT7 1819 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 ARFGEF3Q5TH69 2177 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 TAF1LQ8IZX4 1826 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM33P57088 247 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 ZP4Q12836 540 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 TEPPQ6URK8 271 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SYS1Q8N2H4 156 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 BCL2L10Q9HD36 194 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM167BQ9NRX6 74 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 A0A0J9YW62 118 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 CXorf51AA0A1B0GTR3 108 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 LDLRAD4O15165 306 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 NOVP48745 357 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 DNLZQ5SXM8 178 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 PCSK4Q6UW60 755 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 RPS4Y2Q8TD47 263 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 NRXN3Q9Y4C0 1643 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 CORTO00230 105 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SFT2D2O95562 160 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 ZCCHC24Q8N2G6 241 aaKnown RBP7.28□□□□□ -1.24
SCN9A-203ENST00000409672 ZNF418Q8TF45 676 aaPredicted RBP7.28□□□□□ -1.24
SCN9A-203ENST00000409672 RCC2Q9P258 522 aaKnown RBP7.28□□□□□ -1.24
SCN9A-203ENST00000409672 MIOXQ9UGB7 285 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 IFITM10A6NMD0 228 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 EFNB2P52799 333 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 BSPH1Q075Z2 132 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 AKIP1Q9NQ31 210 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 LINC00527Q9UJ94 153 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 PRNDQ9UKY0 176 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 XIRP1Q702N8 1843 aaKnown RBP7.28□□□□□ -1.24
SCN9A-203ENST00000409672 RPL35AP18077 110 aaKnown RBP7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SELENOTP62341 195 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 NUBPLQ8TB37 319 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms