RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ANKRD55Q3KP44 614 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 PLCXD3Q63HM9 321 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 FBXW12Q6X9E4 464 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 MOB3CQ70IA8 216 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 OSR2Q8N2R0 312 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 BHLHE23Q8NDY6 225 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 Q8NFD4 153 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 STOML3Q8TAV4 291 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 SSMEM1Q8WWF3 244 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 MAFIPQ8WZ33 124 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 DYRK2Q92630 601 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 ARPC5LQ9BPX5 153 aa10.42□□□□□ -0.74
CHRNA1-205ENST00000409542 IGKV1D-8A0A087WSZ0 117 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A10PA6NDY2 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A18PA6NE21 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A16PA6NEW6 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A20PA6NIJ5 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A8PA6NJQ4 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A7PA6NKC0 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A22PA8MWA6 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A12PA8MX19 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A5PA8MXJ8 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A23PA8MXZ1 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 KRBOX1C9JBD0 128 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 F8VVB4 439 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 F8VWA3 439 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 ENSAO43768 121 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 TOX4O94842 621 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FSTL3O95633 263 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FCGR3AP08637 254 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A15PP0C7V4 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A13PP0C7W8 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A14PP0C7W9 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 FAM90A24PP0C7X0 464 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 GLRA1P23415 457 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 IER3P46695 156 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 LUMP51884 338 aaPredicted RBP10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 ATXN7L3Q14CW9 347 aaPredicted RBP10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 PRAMEF6Q5VXH4 476 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 PRSS54Q6PEW0 395 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 Q6ZPA2 131 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 SAXO1Q8IYX7 474 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 POC1AQ8NBT0 407 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 LHX4Q969G2 390 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 C2orf50Q96LR7 162 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 CMSS1Q9BQ75 279 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 RNF126Q9BV68 326 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 SIRPDQ9H106 197 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 WDR13Q9H1Z4 485 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 NECAP2Q9NVZ3 263 aa10.41□□□□□ -0.74
CHRNA1-205ENST00000409542 DNAH3Q8TD57 4116 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 IGHV1-69DA0A0B4J2H0 117 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 IQCF6A8MYZ5 107 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 PDCD6O75340 191 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 IGHV1-69P01742 117 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 PI3P19957 117 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 RBM11P57052 281 aaKnown RBP10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 IL15RAQ13261 267 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 DHRS11Q6UWP2 260 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 BVESQ8NE79 360 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 PIGCQ92535 297 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 DCUN1D4Q92564 292 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 SULT4A1Q9BR01 284 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 ZNF2Q9BSG1 426 aaPredicted RBP10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 HDHD3Q9BSH5 251 aaPredicted RBP10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 FAAP24Q9BTP7 215 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 ZNF471Q9BX82 626 aaPredicted RBP10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 OPA3Q9H6K4 179 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 C1orf123Q9NWV4 160 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 DNAJB11Q9UBS4 358 aa10.4□□□□□ -0.74
CHRNA1-205ENST00000409542 A0A1B0GWJ7 208 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 PQLC2LA1A4F0 135 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 CRYM-AS1A6NIL9 109 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 LRRC30A6NM36 301 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 ADAP1O75689 374 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 CST4P01036 141 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 PET100P0DJ07 73 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 OR5H8P0DN80 308 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 NUP62P37198 522 aaPredicted RBP10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 RPL15P61313 204 aaKnown RBP10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 MALLQ13021 153 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 SGPP2Q8IWX5 399 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 C1orf87Q8N0U7 546 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 APOBEC3DQ96AK3 386 aaPredicted RBP10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 C16orf95Q9H693 158 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 UFSP2Q9NUQ7 469 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 TMEM100Q9NV29 134 aa10.39□□□□□ -0.75
CHRNA1-205ENST00000409542 PLXNB1O43157 2135 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 H0YIZ8 118 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 GEMIN2O14893 280 aaKnown RBP10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 FUT3P21217 361 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 GATA4P43694 442 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 ARF6P62330 175 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 PIGYQ3MUY2 71 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 ELP2Q6IA86 826 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 Q6ZS49 121 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 LDLRAD3Q86YD5 345 aa10.38□□□□□ -0.75
CHRNA1-205ENST00000409542 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms