RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TINAGQ9UJW2 476 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 LHFPL6Q9Y693 200 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 A0A1B0GV72 72 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 SNRPCP09234 159 aaKnown RBP15.29■□□□□ 0.04
SMPD4-202ENST00000409031 IGFBP3P17936 291 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-202ENST00000409031 CBLN1P23435 193 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 GFI1Q99684 422 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 GAL3ST2Q9H3Q3 398 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 OR2J3O76001 311 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 GABRG2P18507 467 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 TMEM106BQ9NUM4 274 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 K7N7A8 449 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 OR8A1Q8NGG7 326 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 ZNF355PQ9NSJ1 428 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 FBLN5Q9UBX5 448 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 TAF1LQ8IZX4 1826 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 A0A1W2PPE3 182 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 SLC25A47Q6Q0C1 308 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 TMEM230Q96A57 120 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 NGBQ9NPG2 151 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 A0A1W2PN81 502 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 KIAA1644Q3SXP7 199 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 OR2M7Q8NG81 312 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 ZNF721Q8TF20 911 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 IL36GQ9NZH8 169 aa15.28■□□□□ 0.04
SMPD4-202ENST00000409031 SLC23A3Q6PIS1 610 aa15.27■□□□□ 0.04
SMPD4-202ENST00000409031 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-202ENST00000409031 PQLC2Q6ZP29 291 aa15.27■□□□□ 0.04
SMPD4-202ENST00000409031 CXorf67Q86X51 503 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-202ENST00000409031 NPIPB13A6NJU9 1138 aa15.27■□□□□ 0.04
SMPD4-202ENST00000409031 NPIPB4C9JG80 1138 aa15.27■□□□□ 0.04
SMPD4-202ENST00000409031 HLA-DRB1P01911 266 aa15.27■□□□□ 0.04
SMPD4-202ENST00000409031 FGFRL1Q8N441 504 aa15.27■□□□□ 0.04
SMPD4-202ENST00000409031 PMCHL2Q9BQD1 86 aa15.27■□□□□ 0.04
SMPD4-202ENST00000409031 DNPH1O43598 174 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 AMBPP02760 352 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 GZMHP20718 246 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 OR8B3Q8NGG8 313 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 SPSB4Q96A44 273 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 GREB1LQ9C091 1923 aaPredicted RBP15.27■□□□□ 0.03
SMPD4-202ENST00000409031 IGHV1OR21-1A0A087WYE8 117 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 S1PR2O95136 353 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 CCL2P13500 99 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 UQCRFS1P47985 274 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 GFI1BQ5VTD9 330 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 MRPL37Q9BZE1 423 aaKnown RBP15.27■□□□□ 0.03
SMPD4-202ENST00000409031 PRNDQ9UKY0 176 aa15.27■□□□□ 0.03
SMPD4-202ENST00000409031 TRAV9-1A0A075B6T8 112 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 MS4A18H0YCH9 400 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 TSPAN2O60636 221 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 ADCYAP1P18509 176 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 ORM2P19652 201 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 EGR4Q05215 589 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 MS4A18Q3C1V0 323 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 PTCRAQ6ISU1 281 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 IGHMP01871 453 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 RNPS1Q15287 305 aaKnown RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 ATOH7Q8N100 152 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 RASL10BQ96S79 203 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 TRIP12Q14669 1992 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 TRAV39A0A0B4J263 110 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 BTF3P20290 206 aaKnown RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 COMPP49747 757 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 SRSF4Q08170 494 aaKnown RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 HES1Q14469 280 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 RHBDD2Q6NTF9 364 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 OR52L2PQ8NGH6 319 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 TBL2Q9Y4P3 447 aaKnown RBP15.26■□□□□ 0.03
SMPD4-202ENST00000409031 SFTPCP11686 197 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 IL11P20809 199 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 RIPPLY2Q5TAB7 128 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 LINC00114Q6XXX2 140 aa15.26■□□□□ 0.03
SMPD4-202ENST00000409031 A0A1B0GW64 132 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 SPRED2Q7Z698 418 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 TMEM116Q8NCL8 245 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 TM2D1Q9BX74 207 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 CXCL1P09341 107 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 C5orf17Q8NAS9 161 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 TRAV38-1A0A0B4J264 116 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 TMEM210A6NLX4 147 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 RPL23P62829 140 aaKnown RBP15.25■□□□□ 0.03
SMPD4-202ENST00000409031 RTP5Q14D33 572 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 CELA2BP08218 269 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-202ENST00000409031 LINC00869P0C866 280 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 ZNF137PP52743 207 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 MRPS11P82912 194 aaKnown RBP15.25■□□□□ 0.03
SMPD4-202ENST00000409031 LRRC75BQ2VPJ9 315 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 C6orf15Q6UXA7 325 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-202ENST00000409031 OR2M3Q8NG83 312 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 VSTM2AQ8TAG5 236 aa15.25■□□□□ 0.03
SMPD4-202ENST00000409031 CRYABP02511 175 aaKnown RBP15.24■□□□□ 0.03
SMPD4-202ENST00000409031 NUBP1P53384 320 aa15.24■□□□□ 0.03
SMPD4-202ENST00000409031 OR2Y1Q8NGV0 311 aa15.24■□□□□ 0.03
SMPD4-202ENST00000409031 GABRG3Q99928 467 aa15.24■□□□□ 0.03
SMPD4-202ENST00000409031 DEFB127Q9H1M4 99 aa15.24■□□□□ 0.03
SMPD4-202ENST00000409031 QSER1Q2KHR3 1735 aa15.24■□□□□ 0.03
SMPD4-202ENST00000409031 IGHV2-70P01814 119 aa15.24■□□□□ 0.03
SMPD4-202ENST00000409031 ZNF818PQ6ZRF7 136 aa15.24■□□□□ 0.03
SMPD4-202ENST00000409031 SFTPA1Q8IWL2 248 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms