RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 ZNF585BQ52M93 769 aa6.38□□□□□ -1.39
NLRC4-204ENST00000404025 CYB561D1Q8N8Q1 229 aa6.38□□□□□ -1.39
NLRC4-204ENST00000404025 OR8G5Q8NG78 346 aa6.38□□□□□ -1.39
NLRC4-204ENST00000404025 LSM10Q969L4 123 aaKnown RBP6.38□□□□□ -1.39
NLRC4-204ENST00000404025 KIAA1456Q9P272 454 aa6.38□□□□□ -1.39
NLRC4-204ENST00000404025 KMT2EQ8IZD2 1858 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 H3BQ15 152 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 IGLV2-14P01704 120 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 HBZP02008 142 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 KIR2DL2P43627 348 aaPredicted RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 HOXA1P49639 335 aaPredicted RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 RAB11AP62491 216 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ARL16Q0P5N6 197 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 HABP2Q14520 560 aaPredicted RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 EIF2S3LQ2VIR3 472 aaKnown RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF718Q3SXZ3 478 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 VHLLQ6RSH7 139 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF429Q86V71 674 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF610Q8N9Z0 462 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 OPN3Q9H1Y3 402 aaPredicted RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 CXXC4Q9H2H0 198 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 RPRMQ9NS64 109 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 TREM2Q9NZC2 230 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 MMP24Q9Y5R2 645 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 USF3Q68DE3 2245 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 SPTBN2O15020 2390 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 UBE2L5PA0A1B0GUS4 154 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF98A6NK75 572 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 OR5H1A6NKK0 313 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 TMEM210A6NLX4 147 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 J3QW42 95 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 RAMP3O60896 148 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 SCAF4O95104 1147 aaKnown RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 WT1P19544 449 aaPredicted RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 RPS10P46783 165 aaKnown RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 GLIPR1P48060 266 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 TLE1Q04724 770 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 CATR1Q13166 79 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 RHEBQ15382 184 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 SPINK9Q5DT21 86 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF787Q6DD87 383 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF561Q8N587 486 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 NIPSNAP3BQ9BS92 247 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 VSIRQ9H7M9 311 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 HMGB3O15347 200 aaKnown RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 IGHV3-13P01766 116 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 IGHV3-7P01780 117 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 SRP19P09132 144 aaKnown RBP6.37□□□□□ -1.39
NLRC4-204ENST00000404025 CECR9P0C854 216 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 RAB5AP20339 215 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 SSTR5P35346 364 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 COL10A1Q03692 680 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 MSMO1Q15800 293 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 DOCK11Q5JSL3 2073 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 OR2Z1Q8NG97 314 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 RAB39BQ96DA2 213 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 DCTN5Q9BTE1 182 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 FAM234AQ9H0X4 552 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 METRNQ9UJH8 293 aa6.37□□□□□ -1.39
NLRC4-204ENST00000404025 OTOGLQ3ZCN5 2332 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 OOEPA6NGQ2 149 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 SLC25A6P12236 298 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 LINC00205P59089 165 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 RPL30P62888 115 aaKnown RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 SLC38A11Q08AI6 406 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 LRRC29Q8WV35 223 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 RBMXL1Q96E39 390 aaKnown RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 OR4C12Q96R67 309 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF665Q9H7R5 613 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 MBNL3Q9NUK0 354 aaKnown RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 CLN8Q9UBY8 286 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 PROCRQ9UNN8 238 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 PSG11Q9UQ72 335 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 WIPI2Q9Y4P8 454 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 INTS1Q8N201 2190 aaKnown RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 KIAA1324LA8MWY0 1029 aaPredicted RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 NPIPB11E5RHQ5 1161 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 PTBP3O95758 552 aaKnown RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 S100A9P06702 114 aaKnown RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 CD200P41217 278 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 ICAM4Q14773 271 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF295-AS1Q8N0V1 137 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF525Q8N782 197 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF645Q8N7E2 425 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 WDR31Q8NA23 367 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 PTPRZ1P23471 2315 aaPredicted RBP6.36□□□□□ -1.39
NLRC4-204ENST00000404025 CEBPZOSA8MTT3 80 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 S1PR2O95136 353 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 IGHG3P01860 377 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 ZNF83P51522 516 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 DLK1P80370 383 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 SMIM21Q3B7S5 101 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 WDR82Q6UXN9 313 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 ACP7Q6ZNF0 438 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 CLDND2Q8NHS1 167 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 RBKSQ9H477 322 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 SMDT1Q9H4I9 107 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 GNG12Q9UBI6 72 aa6.36□□□□□ -1.39
NLRC4-204ENST00000404025 LOC400499M0QZD8 3231 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms