RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 TCRBV16S1A1N1A0A5B0 115 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 ZIC3O60481 467 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 LINC00614P0C842 121 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 FAM27D1Q5T7N8 215 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 MRPL52Q86TS9 123 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 ANGPTL4Q9BY76 406 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 RNASE4P34096 147 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 P2RY4P51582 365 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 FABP5Q01469 135 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 GVQW1Q8N7I0 195 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 ZNF707Q96C28 371 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 TMEM38AQ9H6F2 299 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 SIRT7Q9NRC8 400 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 SIGLEC5O15389 551 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 CHST1O43916 411 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 HSPB1P04792 205 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 CFHR1Q03591 330 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 LRP12Q9Y561 859 aa9.72□□□□□ -0.85
CACNA1C-208ENST00000399601 HOXD3P31249 432 aaPredicted RBP9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 TGIF1Q15583 401 aa9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 OR8D4Q8NGM9 314 aa9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 FUT5Q11128 374 aa9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 LINC01560Q8TB33 94 aa9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 CLEC7AQ9BXN2 247 aa9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 ARFGEF2Q9Y6D5 1785 aa9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 MYH11P35749 1972 aa9.71□□□□□ -0.85
CACNA1C-208ENST00000399601 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 AKIP1Q9NQ31 210 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 CBLN4Q9NTU7 201 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 PRSS42Q7Z5A4 293 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 FBXL15Q9H469 300 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 TRAV2A0A0B4J234 112 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 WNT9BO14905 357 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 MBPP02686 304 aaPredicted RBP9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 BTG1P62324 171 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 FMODQ06828 376 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 SRSF6Q13247 344 aaKnown RBP9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 PMCHL1Q16048 86 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 DEGS2Q6QHC5 323 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 PGLYRP3Q96LB9 341 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 SLC25A2Q9BXI2 301 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 SLC25A37Q9NYZ2 338 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 KCNE3Q9Y6H6 103 aa9.71□□□□□ -0.86
CACNA1C-208ENST00000399601 FOXI3A8MTJ6 420 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 TSPAN7P41732 249 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 SAXO2Q658L1 398 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 GLDNQ6ZMI3 551 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 TMEM229BQ8NBD8 167 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 NT5CQ8TCD5 201 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 LINC01587Q99440 93 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 TRBV20OR9-2A0A075B6H5 130 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 TRAV41A0A0B4J266 112 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 SNRPGP15A8MWD9 76 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 M0R381 172 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 CEACAM4O75871 244 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 NCR2O95944 276 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 FUT3P21217 361 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 ISL1P61371 349 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 VAX1Q5SQQ9 334 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 Q6ZNB5 142 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 PELI3Q8N2H9 469 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 KBTBD11-OT1A0A1B0GTJ5 212 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 hCG_38984A0A1B0GV85 526 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 C9orf170A2RU37 121 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 OR4X2Q8NGF9 303 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 OR6X1Q8NH79 312 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 FAM168AQ92567 244 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 INSL4Q14641 139 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 UNQ6494/PRO21346Q6UXR6 183 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 PMCHL2Q9BQD1 86 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 MEGF9Q9H1U4 602 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 MMP16P51512 607 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 RAE1P78406 368 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 RAB40CQ96S21 281 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 TTTY12Q9BZ98 90 aa9.7□□□□□ -0.86
CACNA1C-208ENST00000399601 GON4LQ3T8J9 2241 aa9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 CD33P20138 364 aa9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 EGR3Q06889 387 aa9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 CYS1Q717R9 158 aa9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 DDA1Q9BW61 102 aa9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 FNDC4Q9H6D8 234 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 KIAA0100Q14667 2235 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 CXorf1O96002 111 aa9.69□□□□□ -0.86
CACNA1C-208ENST00000399601 TRGC2P03986 189 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms