RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 BMP5P22003 454 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 CNN1P51911 297 aaKnown RBP11.86□□□□□ -0.51
APOB-202ENST00000399256 PMP22Q01453 160 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 FAM78BQ5VT40 261 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 LSM10Q969L4 123 aaKnown RBP11.86□□□□□ -0.51
APOB-202ENST00000399256 POLR3KQ9Y2Y1 108 aaPredicted RBP11.86□□□□□ -0.51
APOB-202ENST00000399256 A0A096LPE4 126 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 A0A1W2PPZ6 126 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 GJE1A6NN92 205 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 GGCTO75223 188 aaKnown RBP11.85□□□□□ -0.51
APOB-202ENST00000399256 ZNF25P17030 456 aaPredicted RBP11.85□□□□□ -0.51
APOB-202ENST00000399256 HOXA6P31267 233 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 CCKARP32238 428 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 CCL7P80098 99 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 IGHV5-10-1A0A0J9YXX1 117 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 C1QTNF9BB2RNN3 333 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 PAGE4O60829 102 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 CBR3O75828 277 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 WNT5AP41221 380 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 ERVFC1-1P60608 527 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
APOB-202ENST00000399256 MRPL21Q7Z2W9 205 aaKnown RBP11.85□□□□□ -0.51
APOB-202ENST00000399256 GGNQ86UU5 652 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 TMEM256Q8N2U0 113 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 OR10G9Q8NGN4 311 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 OR10G7Q8NGN6 311 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 ABHD3Q8WU67 409 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 ANAPC16Q96DE5 110 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 CCDC74BQ96LY2 380 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 PRDM14Q9GZV8 571 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 OCIAD1Q9NX40 245 aa11.85□□□□□ -0.51
APOB-202ENST00000399256 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 WDR1O75083 606 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 EGR1P18146 543 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 B3GALT5-AS1P59052 145 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 IGFBP7Q16270 282 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 CEACAM21Q3KPI0 293 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 CISD2Q8N5K1 135 aaKnown RBP11.84□□□□□ -0.51
APOB-202ENST00000399256 ZNF552Q9H707 407 aaPredicted RBP11.84□□□□□ -0.51
APOB-202ENST00000399256 TMEM9BQ9NQ34 198 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 IGHV1-45A0A0A0MS14 117 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 C5orf49A4QMS7 147 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 TOX3O15405 576 aaPredicted RBP11.84□□□□□ -0.51
APOB-202ENST00000399256 TDGF1P3P51864 188 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 BTNL3Q6UXE8 466 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 OR10D3Q8NH80 312 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 CTXND1A0A1B0GTU2 59 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 NUPR1O60356 82 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 IL3RAP26951 378 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 RPL29P47914 159 aaKnown RBP11.84□□□□□ -0.51
APOB-202ENST00000399256 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 SAXO1Q8IYX7 474 aa11.84□□□□□ -0.51
APOB-202ENST00000399256 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
APOB-202ENST00000399256 TECTAO75443 2155 aa11.83□□□□□ -0.51
APOB-202ENST00000399256 A0A0U1RQK1 487 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 ZNF320A2RRD8 509 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 ZNF705FA8MVS1 300 aaPredicted RBP11.83□□□□□ -0.52
APOB-202ENST00000399256 ZNF705DP0CH99 300 aaPredicted RBP11.83□□□□□ -0.52
APOB-202ENST00000399256 ZNF705BP0CI00 300 aaPredicted RBP11.83□□□□□ -0.52
APOB-202ENST00000399256 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
APOB-202ENST00000399256 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 KCNIP4Q6PIL6 250 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 CRYAAP02489 173 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 TFF3Q07654 80 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 NEIL1Q96FI4 390 aaPredicted RBP11.83□□□□□ -0.52
APOB-202ENST00000399256 PARD6GQ9BYG4 376 aaPredicted RBP11.83□□□□□ -0.52
APOB-202ENST00000399256 RIMS4Q9H426 269 aaPredicted RBP11.83□□□□□ -0.52
APOB-202ENST00000399256 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.52
APOB-202ENST00000399256 A6NNC1 897 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 TRAPPC6AO75865 159 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 TYMSP04818 313 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 RFPL3SP0C7P2 107 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 CD33P20138 364 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 NPPCP23582 126 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 WIPI1Q5MNZ9 446 aaPredicted RBP11.82□□□□□ -0.52
APOB-202ENST00000399256 C1orf194Q5T5A4 169 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 ZNF705AQ6ZN79 300 aaPredicted RBP11.82□□□□□ -0.52
APOB-202ENST00000399256 COLCA1Q6ZS62 124 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 DLL3Q9NYJ7 618 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 CLN8Q9UBY8 286 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 LILRA1O75019 489 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 UMODP07911 640 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 COX6A1P12074 109 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 MPLP40238 635 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 RPS19BP1Q86WX3 136 aaKnown RBP11.82□□□□□ -0.52
APOB-202ENST00000399256 RBM14Q96PK6 669 aaKnown RBP11.82□□□□□ -0.52
APOB-202ENST00000399256 MANBALQ9NQG1 85 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 IL17BQ9UHF5 180 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 TIMM9Q9Y5J7 89 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 DIDO1Q9BTC0 2240 aaKnown RBP11.82□□□□□ -0.52
APOB-202ENST00000399256 PIGBOS1A0A0B4J2F0 54 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 NGFP01138 241 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 TDGF1P13385 188 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 GCH1P30793 250 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 MLF1P58340 268 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms