RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CHST1O43916 411 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 P04436 131 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 TNFRSF4P43489 277 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 CTXN1P60606 82 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 ALG10Q5BKT4 473 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 SPATA31B1PQ5VZV4 182 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 FCRL6Q6DN72 434 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 PLXDC2Q6UX71 529 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF788Q6ZQV5 615 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 OR10V1Q8NGI7 309 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM106AQ96A25 262 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM234AQ9H0X4 552 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 ACKR4Q9NPB9 350 aa5.65□□□□□ -1.51
TM9SF4-202ENST00000398022 HRH1P35367 487 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 TAS2R19P59542 299 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF141Q15928 474 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 ZFAND6Q6FIF0 208 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 ANKRD16Q6P6B7 361 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 LINC00336Q6ZUF6 198 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM183AQ8IXX5 376 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEFF1Q8IYR6 380 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 MUC20Q8N307 709 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 FGF13Q92913 245 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 Q96M85 177 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 SLC25A21Q9BQT8 299 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 CABLES2Q9BTV7 478 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 UQCC1Q9NVA1 299 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 NAT8BQ9UHF3 227 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 CDC42EP3Q9UKI2 254 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 XKRYO14609 159 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BKO60814 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HLA-DQA2P01906 255 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BJP06899 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 LYL1P12980 280 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BOP23527 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BBP33778 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 IER3P46695 156 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BDP58876 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 NANOS3P60323 173 aaKnown RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BCP62807 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 OC90Q02509 493 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HGFACQ04756 655 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST2H2BEQ16778 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 RPEL1Q2QD12 228 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HEPN1Q6WQI6 88 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 LINC00114Q6XXX2 140 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 ZAR1Q86SH2 424 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 WFDC3Q8IUB2 231 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 CA13Q8N1Q1 262 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 C11orf44Q8N8P7 122 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 OR1J4Q8NGS1 313 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 RPS4Y2Q8TD47 263 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BHQ93079 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 GRAMD2BQ96HH9 432 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 GPX7Q96SL4 187 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF587Q96SQ5 575 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BNQ99877 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 HIST1H2BMQ99879 126 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 MED29Q9NX70 200 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 DOCK9Q9BZ29 2069 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 IDSB3KWA1 339 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 NUDT3O95989 172 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 CYB5AP00167 134 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 MGMTP16455 207 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 RPL12P30050 165 aaKnown RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM267Q0VDI3 215 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM183BQ1AE95 376 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 LINC01620Q4KN68 170 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF660Q6AZW8 331 aaPredicted RBP5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 OR1S2Q8NGQ3 325 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 OR1B1Q8NGR6 318 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 PLPPR2Q96GM1 343 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 GFI1Q99684 422 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 C1QTNF4Q9BXJ3 329 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 ATG5Q9H1Y0 275 aa5.64□□□□□ -1.51
TM9SF4-202ENST00000398022 TRBV5-5A0A0J9YX44 114 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM90A10PA6NDY2 464 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 GAGE12JA6NER3 117 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 FABP5P3A8MUU1 101 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 PHF1O43189 567 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 GAGE7O76087 117 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 GAGE12FP0CL80 117 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 GAGE12GP0CL81 117 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 GAGE12IP0CL82 117 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 PTHLHP12272 177 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 RPL24P83731 157 aaKnown RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 AKR1C1Q04828 323 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 GAGE4Q13068 117 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 DHRS2Q13268 280 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 ATXN7L3Q14CW9 347 aaPredicted RBP5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 OR2T2Q6IF00 324 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 OPN5Q6U736 354 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 IL22RA1Q8N6P7 574 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 OR8S1Q8NH09 359 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 PHYHIPLQ96FC7 376 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 HRASLS2Q9NWW9 162 aa5.63□□□□□ -1.51
TM9SF4-202ENST00000398022 LSM5Q9Y4Y9 91 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms