RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 FAM240BA0A1B0GVZ2 78 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 hADV38S2A0JD32 116 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 ODAMA1E959 279 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 PLA2G10O15496 165 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 PMP2P02689 132 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 OPN1MWP04001 364 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 CTXN2P0C2S0 81 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 OPN1MW2P0DN77 364 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 OPN1MW3P0DN78 364 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 COX7A1P24310 79 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 HRH1P35367 487 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 GLIPR1P48060 266 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 P2RX3P56373 397 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 TSPAN5P62079 268 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF273Q14593 569 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 CDK10Q15131 360 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 LRRC75BQ2VPJ9 315 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 TRIM16LQ309B1 348 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 PLA1AQ53H76 456 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 KPRPQ5T749 579 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF880Q6PDB4 577 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 CCBE1Q6UXH8 406 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF782Q6ZMW2 699 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-202ENST00000396828 Q6ZPA2 131 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 Q6ZS46 218 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF554Q86TJ5 538 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 TMEM17Q86X19 198 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 OR4C16Q8NGL9 310 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 SNAPC3Q92966 411 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 COQ2Q96H96 371 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 CYYR1Q96J86 154 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 C11orf54Q9H0W9 315 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-202ENST00000396828 SERTAD4Q9NUC0 356 aa8.33□□□□□ -1.08
NEDD8-202ENST00000396828 MBNL3Q9NUK0 354 aaKnown RBP8.33□□□□□ -1.08
NEDD8-202ENST00000396828 TRGV10A0A0A0MS01 117 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 TRBV23-1A0A0A0MS06 115 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 M0QYG6 137 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 FABP7O15540 132 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 SPINT2O43291 252 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 AMY2AP04746 511 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 VSIG10L2P0DP72 767 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 CD28P10747 220 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 RCC1P18754 421 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-202ENST00000396828 GZMHP20718 246 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 GLP1RP43220 463 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 DLX6P56179 175 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 RPL31P62899 125 aaKnown RBP8.32□□□□□ -1.08
NEDD8-202ENST00000396828 HLA-DRB3P79483 266 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 MEF2CQ06413 473 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-202ENST00000396828 OXLD1Q5BKU9 147 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 VAX1Q5SQQ9 334 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 ARRDC1Q8N5I2 433 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 TPRX1Q8N7U7 411 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 MINDY2Q8NBR6 621 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 OR4A4PQ8NGN8 299 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 MRGPRDQ8TDS7 321 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 PRRT1Q99946 306 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 TINAGL1Q9GZM7 467 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF702PQ9H963 129 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 TAF9BQ9HBM6 251 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 EHFQ9NZC4 300 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 COPZ2Q9P299 210 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
NEDD8-202ENST00000396828 IGKV1D-8A0A087WSZ0 117 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 A0A1W2PPH5 198 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 ADARB2-AS1A8MUL3 147 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 SCTP09683 121 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 GSTT2P0CG29 244 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OR5H8P0DN80 308 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 RFX2P48378 723 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 HMGN3Q15651 99 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 FBLN7Q53RD9 439 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 FAAP20Q6NZ36 180 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OVCH2Q7RTZ1 564 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 NRARPQ7Z6K4 114 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 TMEM219Q86XT9 240 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 PRR18Q8N4B5 295 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OR4D10Q8NGI6 311 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OR51S1Q8NGJ8 323 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OR4C13Q8NGP0 309 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OR6F1Q8NGZ6 308 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OR56B4Q8NH76 319 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 OR10J5Q8NHC4 309 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 WIPF2Q8TF74 440 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-202ENST00000396828 IL1F10Q8WWZ1 152 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 GALMQ96C23 342 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 GINS4Q9BRT9 223 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 MMP28Q9H239 520 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 GAL3ST2Q9H3Q3 398 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 UBE2J1Q9Y385 318 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-202ENST00000396828 LINC00312Q9Y6C7 94 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 DSCAML1Q8TD84 2053 aa8.31□□□□□ -1.08
NEDD8-202ENST00000396828 TRAV39A0A0B4J263 110 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF729A6NN14 1252 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-202ENST00000396828 C12orf77C9JDV5 145 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 SDCBPO00560 298 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-202ENST00000396828 BET1O15155 118 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 HSPA12AO43301 675 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 DIRAS3O95661 229 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 ZBTB25P24278 435 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms