RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 FGF22Q9HCT0 170 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 SIGLEC7Q9Y286 467 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 A1L4Q6 167 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
COL4A4-201ENST00000396625 COL16A1Q07092 1604 aaPredicted RBP9.07□□□□□ -0.96
COL4A4-201ENST00000396625 HYPMO75409 117 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 OR11H7Q8NGC8 314 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 GALNT14Q96FL9 552 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 KIR2DL4Q99706 377 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 RNF122Q9H9V4 155 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 CLN8Q9UBY8 286 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 FTH1P19P0C7X4 201 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 KLK2P20151 261 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 MFAP4P55083 255 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 FGF14Q92915 247 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF414Q96IQ9 312 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 CREBBPQ92793 2442 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 EIF3GO75821 320 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ETHE1O95571 254 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF250P15622 560 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 MMP16P51512 607 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 RAE1P78406 368 aaKnown RBP9.07□□□□□ -0.96
COL4A4-201ENST00000396625 OR8B12Q8NGG6 310 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 WIPI2Q9Y4P8 454 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 IGLV3-10A0A075B6K4 115 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 PPYP01298 95 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 OR4A5Q8NH83 315 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ASB1Q9Y576 335 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 TMEM56-RWDD3S4R434 201 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 LIPFP07098 398 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF32P17041 273 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF56Q15929 161 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 MBNL2Q5VZF2 373 aaKnown RBP9.07□□□□□ -0.96
COL4A4-201ENST00000396625 NIT1Q86X76 327 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 KLHDC9Q8NEP7 349 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF107Q9UII5 783 aaPredicted RBP9.07□□□□□ -0.96
COL4A4-201ENST00000396625 A0A0B4J293 547 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF770Q6IQ21 691 aaPredicted RBP9.07□□□□□ -0.96
COL4A4-201ENST00000396625 ABHD1Q96SE0 405 aa9.07□□□□□ -0.96
COL4A4-201ENST00000396625 SIPA1L3O60292 1781 aaPredicted RBP9.06□□□□□ -0.96
COL4A4-201ENST00000396625 NDUFB4O95168 129 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 PSG2P11465 335 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 MUC1P15941 1255 aaPredicted RBP9.06□□□□□ -0.96
COL4A4-201ENST00000396625 C17orf47Q8NEP4 570 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 FAM216AQ8WUB2 273 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 HCSTQ9UBK5 93 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 ELF5Q9UKW6 265 aaPredicted RBP9.06□□□□□ -0.96
COL4A4-201ENST00000396625 INSIG2Q9Y5U4 225 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 SBF2Q86WG5 1849 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 MED13Q9UHV7 2174 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 LINC00862A6NCI5 91 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 RAB1CQ92928 201 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 RTN4RQ9BZR6 473 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 ZDHHC8Q9ULC8 765 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 SYNGR1O43759 233 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 SRIP30626 198 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 ALKAL1Q6UXT8 129 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 OVCH2Q7RTZ1 564 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 PTP4A1Q93096 173 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 ZG16BQ96DA0 208 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 GPR82Q96P67 336 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 TMEFF2Q9UIK5 374 aaPredicted RBP9.06□□□□□ -0.96
COL4A4-201ENST00000396625 IGHV3OR16-12A0A075B7B8 117 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 SLC17A3O00476 420 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 S1PR2O95136 353 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 BHLHA15Q7RTS1 189 aaPredicted RBP9.06□□□□□ -0.96
COL4A4-201ENST00000396625 TEX29Q8N6K0 151 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 PRDX2P32119 198 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 MVDP53602 400 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 CTAG1AP78358 180 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 TMEM45BQ96B21 275 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 TMEM160Q9NX00 188 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 PSMB11A5LHX3 300 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 TRAV21A0A0B4J279 112 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 ARL14EPLP0DKL9 152 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 ANOS1P23352 680 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 ASB10Q8WXI3 467 aa9.06□□□□□ -0.96
COL4A4-201ENST00000396625 SLC25A40Q8TBP6 338 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 NPFFR1Q9GZQ6 430 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 QSER1Q2KHR3 1735 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 GFERP55789 205 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 METTL1Q9UBP6 276 aaKnown RBP9.05□□□□□ -0.96
COL4A4-201ENST00000396625 LYZL2Q7Z4W2 148 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 PHLDA1Q8WV24 401 aaPredicted RBP9.05□□□□□ -0.96
COL4A4-201ENST00000396625 PRDM14Q9GZV8 571 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 TRBV9A0A0B4J1U6 114 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 WNT9BO14905 357 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 NFAM1Q8NET5 270 aaPredicted RBP9.05□□□□□ -0.96
COL4A4-201ENST00000396625 LOXL3P58215 753 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
COL4A4-201ENST00000396625 PLPP3O14495 311 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 LDLRAD4O15165 306 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
COL4A4-201ENST00000396625 NT5CQ8TCD5 201 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 CEACAM18A8MTB9 384 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms