RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 K7N7A8 449 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 TMEM50AO95807 157 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 FAM53AQ6NSI3 398 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-202ENST00000394820 TCF23Q7RTU1 214 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 C1orf210Q8IVY1 113 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 OR2V1Q8NHB1 315 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-202ENST00000394820 C11orf94C9JXX5 98 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 FGF5P12034 268 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 MPLP40238 635 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 SUCLG1P53597 346 aaKnown RBP11.3□□□□□ -0.6
NFKB1-202ENST00000394820 RAC1P63000 192 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 IL24Q13007 206 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 ATOH7Q8N100 152 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 CT55Q8WUE5 264 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 TCFL5Q9UL49 500 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 SELENOKQ9Y6D0 94 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 A6NNC1 897 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 CTAG1AP78358 180 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 AESQ08117 197 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 TIPARPQ7Z3E1 657 aaKnown RBP11.3□□□□□ -0.6
NFKB1-202ENST00000394820 IMMP1LQ96LU5 166 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-202ENST00000394820 FKBP11Q9NYL4 201 aa11.3□□□□□ -0.6
NFKB1-202ENST00000394820 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 C1QTNF9BB2RNN3 333 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 PITX3O75364 302 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 LYZL6O75951 148 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 CELA3AP09093 270 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 FAM27BQ5VT28 67 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 SGMS2Q8NHU3 365 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 C14orf144Q96I85 54 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 VAX2Q9UIW0 290 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 CEP192Q8TEP8 1941 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 DOPEY2Q9Y3R5 2298 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 A0A0G2JRQ6 117 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 FCGR3BO75015 233 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 CST2P09228 141 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 COX5AP20674 150 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 TCTAP57738 103 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 PAX5Q02548 391 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 C6orf15Q6UXA7 325 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-202ENST00000394820 B4GALT7Q9UBV7 327 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 TUBD1Q9UJT1 453 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 PITPNC1Q9UKF7 332 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 F6UZH7 168 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 GCSAMLQ5JQS6 135 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 DHRS13Q6UX07 377 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 ZNF439Q8NDP4 499 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
NFKB1-202ENST00000394820 OR7C2O60412 319 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 GYPAP02724 150 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 PAX6P26367 422 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 OR5I1Q13606 314 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 DDA1Q9BW61 102 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 NUP210LQ5VU65 1888 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
NFKB1-202ENST00000394820 RAC3P60763 192 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 PPP1CBP62140 327 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 CLDND2Q8NHS1 167 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 ANGPTL4Q9BY76 406 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 PARLQ9H300 379 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 PNRC2Q9NPJ4 139 aaKnown RBP11.28□□□□□ -0.6
NFKB1-202ENST00000394820 TNCP24821 2201 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 RPL36A-HNRNPH2H7BZ11 118 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
NFKB1-202ENST00000394820 NTF4P34130 210 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
NFKB1-202ENST00000394820 FADS6Q8N9I5 356 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 IER2Q9BTL4 223 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 WNT5BQ9H1J7 359 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 CLCF1Q9UBD9 225 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 SH3BGRL2Q9UJC5 107 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 OR2W1Q9Y3N9 320 aa11.28□□□□□ -0.6
NFKB1-202ENST00000394820 PINLYPA6NC86 204 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 FCN1O00602 326 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 ST8SIA5O15466 376 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 TIMM8AO60220 97 aaPredicted RBP11.27□□□□□ -0.6
NFKB1-202ENST00000394820 ZG16O60844 167 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 CYB5R3P00387 301 aaPredicted RBP11.27□□□□□ -0.6
NFKB1-202ENST00000394820 IGHV3-48P01763 117 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.6
NFKB1-202ENST00000394820 MRPL54Q6P161 138 aaKnown RBP11.27□□□□□ -0.6
NFKB1-202ENST00000394820 DMRTC2Q8IXT2 367 aaPredicted RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms