RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 G3V3Q6 166 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 PIN1P1O15428 100 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 DHHO43323 396 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 SAP30O75446 220 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 GNG5P63218 68 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 MFGE8Q08431 387 aaPredicted RBP6.95□□□□□ -1.3
LIMS1-203ENST00000393310 ZNF695Q8IW36 515 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 NOX3Q9HBY0 568 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 FLRT3Q9NZU0 649 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 CLCF1Q9UBD9 225 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 SDK2Q58EX2 2172 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 HECTD1Q9ULT8 2610 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 A0A096LPE4 126 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 HKR1P10072 659 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 FAM3BP58499 235 aaPredicted RBP6.95□□□□□ -1.3
LIMS1-203ENST00000393310 GAGE2BQ13066 116 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 GAGE2EQ4V326 116 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 OR52I2Q8NH67 350 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 FAM110DQ8TAY7 271 aaPredicted RBP6.95□□□□□ -1.3
LIMS1-203ENST00000393310 APOBEC3DQ96AK3 386 aaPredicted RBP6.95□□□□□ -1.3
LIMS1-203ENST00000393310 SPANXB1Q9NS25 103 aaPredicted RBP6.95□□□□□ -1.3
LIMS1-203ENST00000393310 GAGE2DQ9UEU5 116 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 TEX264Q9Y6I9 313 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 COL4A3Q01955 1670 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 PRSS23O95084 383 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 B3GALT4O96024 378 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 SLC35A2P78381 396 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 SFRP4Q6FHJ7 346 aaPredicted RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 OR5A1Q8NGJ0 315 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 OR1S2Q8NGQ3 325 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 TMEM126AQ9H061 195 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 CXXC4Q9H2H0 198 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 POFUT1Q9H488 388 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 MPPED1O15442 326 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 EEDO75530 441 aaKnown RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 EIF4EP06730 217 aaKnown RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 FAM157BP0CG42 384 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 PRDX2P32119 198 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 PGGT1BP53609 377 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 SNRPNP63162 240 aaKnown RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 AQP6Q13520 282 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 PSG3Q16557 428 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 OR2Z1Q8NG97 314 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 GRAMD2BQ96HH9 432 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 AMBNQ9NP70 447 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 LIN7CQ9NUP9 197 aaKnown RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 POLDIP2Q9Y2S7 368 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 ARL2-SNX15V9GYD0 113 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 hCG_38984A0A1B0GV85 526 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 C19orf84I3L1E1 186 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 J3KT08 172 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 CT45A10P0DMU9 189 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 GABRB1P18505 474 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 IFITM3Q01628 133 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 IRF3Q14653 427 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 AADACL2Q6P093 401 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 SGPP2Q8IWX5 399 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 TMEM106AQ96A25 262 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 LINC00470Q9BZP3 86 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 TMEM38BQ9NVV0 291 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 CHCHD2Q9Y6H1 151 aaPredicted RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 A0A0G2JMM0 328 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 A0A1W2PPB8 328 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 KIR3DP1A8MWS1 328 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 NDUFC2O95298 119 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 HBE1P02100 147 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 IGLV3-21P80748 117 aaPredicted RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 TRMT12Q53H54 448 aaKnown RBP6.94□□□□□ -1.3
LIMS1-203ENST00000393310 ISCA2Q86U28 154 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 TMEM38AQ9H6F2 299 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 RLIMQ9NVW2 624 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 RNF7Q9UBF6 113 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 OSGIN1Q9UJX0 560 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 NEU3Q9UQ49 428 aa6.94□□□□□ -1.3
LIMS1-203ENST00000393310 JMJD1CQ15652 2540 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 DOCK9Q9BZ29 2069 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 CLDN34H7C241 214 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 CA1P00915 261 aaPredicted RBP6.93□□□□□ -1.3
LIMS1-203ENST00000393310 ANOS1P23352 680 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 PRTN3P24158 256 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 TMEM241Q24JQ0 296 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 LGALSLQ3ZCW2 172 aaPredicted RBP6.93□□□□□ -1.3
LIMS1-203ENST00000393310 DEFB108BQ8NET1 73 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 SDR9C7Q8NEX9 313 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 TMEM163Q8TC26 289 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 C10orf105Q8TEF2 133 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 GALMQ96C23 342 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 POLR2J3Q9H1A7 115 aaKnown RBP6.93□□□□□ -1.3
LIMS1-203ENST00000393310 KIAA1456Q9P272 454 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 FOXJ3Q9UPW0 622 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 A0A0A6YYD5 115 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 A8MT66 165 aa6.93□□□□□ -1.3
LIMS1-203ENST00000393310 RPL32P62910 135 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms