RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ABHD17CQ6PCB6 329 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 OR1L3Q8NH93 324 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 FAM222BQ8WU58 562 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 BLNKQ8WV28 456 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 RSPO3Q9BXY4 272 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 ULBP2Q9BZM5 246 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 NXF5Q9H1B4 397 aaKnown RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 METTL7AQ9H8H3 244 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 MTCH1Q9NZJ7 389 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 ANXA10Q9UJ72 324 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 ERRFI1Q9UJM3 462 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 MPDZO75970 2070 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 FASLGP48023 281 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 HIST1H1AQ02539 215 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 ROM1Q03395 351 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 SLC38A11Q08AI6 406 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 C1orf122Q6ZSJ8 110 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 C6orf201Q7Z4U5 140 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 C9orf40Q8IXQ3 194 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 TDHQ8IZJ6 230 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 C5orf30Q96GV9 206 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 GP6Q9HCN6 339 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 CYSLTR1Q9Y271 337 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 HILPDAQ9Y5L2 63 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 AHCTF1Q8WYP5 2266 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 DNAH12Q6ZR08 3092 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 DOCK6Q96HP0 2047 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 H3BMH7 237 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 OR7C1O76099 320 aaPredicted RBP6.59□□□□□ -1.35
VTI1A-201ENST00000393077 HLA-DQA1P01909 254 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 CISD3P0C7P0 127 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 OR1D4P47884 311 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 PLCXD2Q0VAA5 305 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 TMEM196Q5HYL7 178 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 PIGTQ969N2 578 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 ZFYVE21Q9BQ24 234 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 STARD5Q9NSY2 213 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 TRPM6Q9BX84 2022 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 TRBV9A0A0B4J1U6 114 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 A0A0G2JLM5 398 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 NUPR1O60356 82 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 SLC25A6P12236 298 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 VDAC1P21796 283 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 LMO1P25800 156 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 OR3A4PP47883 348 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 PRDX1Q06830 199 aaKnown RBP6.59□□□□□ -1.35
VTI1A-201ENST00000393077 OR52E5Q8NH55 327 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 LIPHQ8WWY8 451 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 ELSPBP1Q96BH3 223 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 WDR34Q96EX3 536 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 COL25A1Q9BXS0 654 aaPredicted RBP6.59□□□□□ -1.35
VTI1A-201ENST00000393077 OBP2AQ9NY56 170 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 DAPP1Q9UN19 280 aa6.59□□□□□ -1.35
VTI1A-201ENST00000393077 COLQQ9Y215 455 aaPredicted RBP6.59□□□□□ -1.35
VTI1A-201ENST00000393077 TDRD6O60522 2096 aaKnown RBP6.59□□□□□ -1.35
VTI1A-201ENST00000393077 TYMSP04818 313 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 SMIM17P0DL12 118 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 FSTP19883 344 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 ANOS1P23352 680 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 CAMPP49913 170 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 GNG4P50150 75 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 PRDX4Q13162 271 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 MMABQ96EY8 250 aaPredicted RBP6.59□□□□□ -1.36
VTI1A-201ENST00000393077 TRIB1Q96RU8 372 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 FAM173AQ9BQD7 235 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 GNB4Q9HAV0 340 aa6.59□□□□□ -1.36
VTI1A-201ENST00000393077 MRPL16Q9NX20 251 aaKnown RBP6.59□□□□□ -1.36
VTI1A-201ENST00000393077 A0A087X0K7 114 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 B5MCH6 92 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 LEPROTL1O95214 131 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 SPINK8P0C7L1 97 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 FAM87AP0C7U9 286 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 F2RP25116 425 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 IL12BP29460 328 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 TNFRSF4P43489 277 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 GPR12P47775 334 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 PRICKLE4Q2TBC4 344 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM52BQ4KMG9 183 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM97Q5BJF2 176 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 ADAMTSL4Q6UY14 1074 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 TMEFF1Q8IYR6 380 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 VSTM2AQ8TAG5 236 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 ZNRF4Q8WWF5 429 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 PATE1Q8WXA2 126 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 SARAFQ96BY9 339 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 BORCS8Q96FH0 119 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 HIF1ANQ9NWT6 349 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 RTTNQ86VV8 2226 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 YLPM1P49750 1951 aaKnown RBP6.58□□□□□ -1.36
VTI1A-201ENST00000393077 PRSS8Q16651 343 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.58□□□□□ -1.36
VTI1A-201ENST00000393077 MMD2Q8IY49 270 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 CRIPAKQ8N1N5 446 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 OR2Z1Q8NG97 314 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 OR10G3Q8NGC4 313 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 CCL4L1Q8NHW4 92 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 SLC25A40Q8TBP6 338 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 APOBEC3DQ96AK3 386 aaPredicted RBP6.58□□□□□ -1.36
VTI1A-201ENST00000393077 AMELYQ99218 206 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms