RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MRPL54Q6P161 138 aaKnown RBP14.76□□□□□ -0.05
SGCB-201ENST00000381431 ZBTB34Q8NCN2 500 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 OR1B1Q8NGR6 318 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 SEBOXQ9HB31 216 aaPredicted RBP14.76□□□□□ -0.05
SGCB-201ENST00000381431 WIPI2Q9Y4P8 454 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 KIR2DS2P43631 304 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 EFNB1P98172 346 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 PACRGQ96M98 296 aaPredicted RBP14.76□□□□□ -0.05
SGCB-201ENST00000381431 SCN5AQ14524 2016 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 H0Y980 276 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 IGHMP01871 453 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 VAMP3Q15836 100 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 TGIF2LYQ8IUE0 185 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 TECRQ9NZ01 308 aaKnown RBP14.76□□□□□ -0.05
SGCB-201ENST00000381431 TUBD1Q9UJT1 453 aa14.76□□□□□ -0.05
SGCB-201ENST00000381431 LOC285556D6RIA3 1793 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 J3QR06 171 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 ARTNQ5T4W7 220 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 DHRS11Q6UWP2 260 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 H1FOOQ8IZA3 346 aaPredicted RBP14.75□□□□□ -0.05
SGCB-201ENST00000381431 C11orf42Q8N5U0 333 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 OR4C12Q96R67 309 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 CHRNA10Q9GZZ6 450 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 AAMDCQ9H7C9 122 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 ZNF407Q9C0G0 2248 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 RPL31P62899 125 aaKnown RBP14.75□□□□□ -0.05
SGCB-201ENST00000381431 KLHDC1Q8N7A1 406 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 VSTM2AQ8TAG5 236 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 OPN3Q9H1Y3 402 aaPredicted RBP14.75□□□□□ -0.05
SGCB-201ENST00000381431 PPP1R32Q7Z5V6 425 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 RLFQ13129 1914 aa14.75□□□□□ -0.05
SGCB-201ENST00000381431 IGHV3-21A0A0B4J1V1 117 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 A0A1B0GTI1 187 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 B4DEV8 164 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 CD8AP01732 235 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 CELA3AP09093 270 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 SERF2P84101 59 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 RARRES2Q99969 163 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 ZIC3O60481 467 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 CD1BP29016 333 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 POC1AQ8NBT0 407 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 OR4F17Q8NGA8 305 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 CCL13Q99616 98 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 TMEM167BQ9NRX6 74 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 TMEM210A6NLX4 147 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 CSN3P07498 182 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 RNF151Q2KHN1 245 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 ASPHD2Q6ICH7 369 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 LINC00596Q86U02 117 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 ZNF552Q9H707 407 aaPredicted RBP14.74□□□□□ -0.05
SGCB-201ENST00000381431 HNRNPA3P51991 378 aaKnown RBP14.74□□□□□ -0.05
SGCB-201ENST00000381431 ZNF818PQ6ZRF7 136 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 FA2HQ7L5A8 372 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 TP53RKQ96S44 253 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 KLHDC3Q9BQ90 382 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 SIRT7Q9NRC8 400 aa14.74□□□□□ -0.05
SGCB-201ENST00000381431 FOSL1P15407 271 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 C10orf128Q5T292 105 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 OR2V2Q96R30 315 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 USF3Q68DE3 2245 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 TRGC2P03986 189 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 CD3EP07766 207 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 SMIM6P0DI80 62 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 PRRX1P54821 245 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 ETFRF1Q6IPR1 90 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 TEPPQ6URK8 271 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 SGMS2Q8NHU3 365 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 FLYWCH2Q96CP2 140 aaKnown RBP14.73□□□□□ -0.05
SGCB-201ENST00000381431 A0A087X0M5 115 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 A0A1B0GX30 115 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 MPV17P39210 176 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 RPEL1Q2QD12 228 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 FAM162BQ5T6X4 162 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 LRP11Q86VZ4 500 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 CALHM1Q8IU99 346 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 FAM122AQ96E09 287 aa14.73□□□□□ -0.05
SGCB-201ENST00000381431 J3QRE1 110 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 MST1P26927 711 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 SUCLG1P53597 346 aaKnown RBP14.72□□□□□ -0.05
SGCB-201ENST00000381431 RND3P61587 244 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 SLC35B1P78383 322 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 MGST3O14880 152 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 SELENOHQ8IZQ5 122 aaKnown RBP14.72□□□□□ -0.05
SGCB-201ENST00000381431 OR4X1Q8NH49 305 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 DICER1Q9UPY3 1922 aaKnown RBP14.72□□□□□ -0.05
SGCB-201ENST00000381431 HELTA6NFD8 242 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 S100A4P26447 101 aaKnown RBP14.72□□□□□ -0.05
SGCB-201ENST00000381431 WNT5AP41221 380 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 TMEM187Q14656 261 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 PDPNQ86YL7 162 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 PRNDQ9UKY0 176 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 C16orf97H3BN30 126 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 IER3P46695 156 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 GABRA6Q16445 453 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 ATRAIDQ6UW56 229 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 ITLN1Q8WWA0 313 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 INSIG2Q9Y5U4 225 aa14.72□□□□□ -0.05
SGCB-201ENST00000381431 K7ESF4 209 aa14.71□□□□□ -0.05
SGCB-201ENST00000381431 NDUFB4O95168 129 aa14.71□□□□□ -0.05
SGCB-201ENST00000381431 MELTFP08582 738 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms