RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 LHX9Q9NQ69 397 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 IGHV1OR21-1A0A087WYE8 117 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 DLX6P56179 175 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 OR2Y1Q8NGV0 311 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 IL19Q9UHD0 177 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 FNDC1Q4ZHG4 1894 aaPredicted RBP10.92□□□□□ -0.66
VPS13A-204ENST00000376634 MAGEA5P43359 124 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 ERVFRD-1P60508 538 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 BEND2Q8NDZ0 799 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 COL18A1P39060 1754 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 J3QR06 171 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 Q6ZS52 159 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 ABHD14BQ96IU4 210 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 VSTM2LQ96N03 204 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 SF3B5Q9BWJ5 86 aaKnown RBP10.92□□□□□ -0.66
VPS13A-204ENST00000376634 PRDM14Q9GZV8 571 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 COL24A1Q17RW2 1714 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 A8MWL6 223 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 TP53I13Q8NBR0 393 aaPredicted RBP10.92□□□□□ -0.66
VPS13A-204ENST00000376634 C17orf47Q8NEP4 570 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 OR4C13Q8NGP0 309 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 PWWP2BQ6NUJ5 590 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 SLC6A13Q9NSD5 602 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 GUCA2BQ16661 112 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 UQCR10Q9UDW1 63 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 C1orf174Q8IYL3 243 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 NTMQ9P121 344 aa10.92□□□□□ -0.66
VPS13A-204ENST00000376634 ANKRD20A5PA0PJZ0 165 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 DAOP14920 347 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 B4GALNT1Q00973 533 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 HIKESHIQ53FT3 197 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 ZBTB34Q8NCN2 500 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 LIPT2A6NK58 231 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 PRR35P0CG20 571 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 XAF1Q6GPH4 301 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 DDB2Q92466 427 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 TCRBV16S1A1N1A0A5B0 115 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 SOSTQ9BQB4 213 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
VPS13A-204ENST00000376634 MPZL1O95297 269 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 OR8G5Q8NG78 346 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 TMEM171Q8WVE6 324 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 CCL21O00585 134 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 GMPPAQ96IJ6 420 aaPredicted RBP10.91□□□□□ -0.66
VPS13A-204ENST00000376634 A0A0B4J293 547 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 NKX2-6A6NCS4 301 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 CRHP06850 196 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 KRTCAP3Q53RY4 240 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 STPG2Q8N412 459 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 ASB5Q8WWX0 329 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 LRRC3BQ96PB8 259 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 CHST5Q9GZS9 411 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 LPAR2Q9HBW0 351 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 GPR35Q9HC97 309 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 PRSS41Q7RTY9 318 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 OR4B1Q8NGF8 309 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 HSPB7Q9UBY9 170 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 ARHGAP32A7KAX9 2087 aa10.91□□□□□ -0.66
VPS13A-204ENST00000376634 C16orf97H3BN30 126 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 KBTBD11O94819 623 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 PATE4P0C8F1 98 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 ZNF714Q96N38 554 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 MBD1Q9UIS9 605 aaPredicted RBP10.9□□□□□ -0.66
VPS13A-204ENST00000376634 CEACAM18A8MTB9 384 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 PAGE4O60829 102 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 PF4V1P10720 104 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 MRPL30Q8TCC3 161 aaKnown RBP10.9□□□□□ -0.66
VPS13A-204ENST00000376634 ADAMTS17Q8TE56 1095 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 CD74P04233 296 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 MRM2Q9UI43 246 aaKnown RBP10.9□□□□□ -0.66
VPS13A-204ENST00000376634 ZSWIM8A7E2V4 1837 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 GALNT14Q96FL9 552 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 EAF1Q96JC9 268 aaPredicted RBP10.9□□□□□ -0.66
VPS13A-204ENST00000376634 RAB33BQ9H082 229 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 COL11A2P13942 1736 aaPredicted RBP10.9□□□□□ -0.66
VPS13A-204ENST00000376634 AGFG2O95081 481 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 CXCL10P02778 98 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 PSG2P11465 335 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 EPHA8P29322 1005 aaPredicted RBP10.9□□□□□ -0.66
VPS13A-204ENST00000376634 AURKAIP1Q9NWT8 199 aaPredicted RBP10.9□□□□□ -0.66
VPS13A-204ENST00000376634 TINAGQ9UJW2 476 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 NAT2P11245 290 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
VPS13A-204ENST00000376634 TMEM183AQ8IXX5 376 aa10.9□□□□□ -0.67
VPS13A-204ENST00000376634 LSM10Q969L4 123 aaKnown RBP10.9□□□□□ -0.67
VPS13A-204ENST00000376634 PRR13Q9NZ81 148 aa10.9□□□□□ -0.67
VPS13A-204ENST00000376634 WNT16Q9UBV4 365 aa10.9□□□□□ -0.67
VPS13A-204ENST00000376634 IGHV3OR16-12A0A075B7B8 117 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 MMP9P14780 707 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 REG1BP48304 166 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 SGMS2Q8NHU3 365 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 HSPB9Q9BQS6 159 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 MRPL16Q9NX20 251 aaKnown RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 IGLV3-16A0A075B6K0 115 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 KLF9Q13886 244 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 PIMREGQ9BSJ6 248 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 MAP1LC3AQ9H492 121 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms