RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 STRAPQ9Y3F4 350 aaKnown RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 TMEM56-RWDD3S4R434 201 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 ZNF705GA8MUZ8 300 aaPredicted RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 ST8SIA3O43173 380 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 OR2H2O95918 312 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 SELEP16581 610 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 HOXC12P31275 282 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 CEACAM6P40199 344 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 GLIPR1P48060 266 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 SRPXP78539 464 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 JOSD1Q15040 202 aaPredicted RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 LBHQ53QV2 105 aaPredicted RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 ZNF324BQ6AW86 544 aaPredicted RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 SELENOHQ8IZQ5 122 aaKnown RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 ZADH2Q8N4Q0 377 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 OR4D5Q8NGN0 318 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 DKK4Q9UBT3 224 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 A0A087WWC5 75 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 AHRRA9YTQ3 701 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 IGKV3-15P01624 115 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 DNLZQ5SXM8 178 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 Q8IYB0 196 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 OR10J5Q8NHC4 309 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 PLPPR1Q8TBJ4 325 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 PRRC2CQ9Y520 2896 aaKnown RBP11.8□□□□□ -0.52
MSH5-202ENST00000375740 SLC33A1O00400 549 aaPredicted RBP11.8□□□□□ -0.52
MSH5-202ENST00000375740 TNFSF12O43508 249 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 GPR137BO60478 399 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 WDR1O75083 606 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 SCAF4O95104 1147 aaKnown RBP11.8□□□□□ -0.52
MSH5-202ENST00000375740 AMBPP02760 352 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 ICAM4Q14773 271 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 CXorf67Q86X51 503 aaPredicted RBP11.8□□□□□ -0.52
MSH5-202ENST00000375740 SNHG12Q9BXW3 62 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 OBP2BQ9NPH6 170 aa11.8□□□□□ -0.52
MSH5-202ENST00000375740 ERRFI1Q9UJM3 462 aaPredicted RBP11.8□□□□□ -0.52
MSH5-202ENST00000375740 A0A1B0GW64 132 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 PGLYRP1O75594 196 aaPredicted RBP11.79□□□□□ -0.52
MSH5-202ENST00000375740 NXPH2O95156 264 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 CDS2O95674 445 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 H1FOOQ8IZA3 346 aaPredicted RBP11.79□□□□□ -0.52
MSH5-202ENST00000375740 C1orf162Q8NEQ5 155 aaPredicted RBP11.79□□□□□ -0.52
MSH5-202ENST00000375740 OR2G3Q8NGZ4 309 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 IL1F10Q8WWZ1 152 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 BOD1Q96IK1 185 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
MSH5-202ENST00000375740 OR2W1Q9Y3N9 320 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
MSH5-202ENST00000375740 TNFSF13O75888 250 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 OMGP23515 440 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 ATP6V0CP27449 155 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 CD200P41217 278 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 GPR157Q5UAW9 335 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 CMTM1Q8IZ96 169 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 PRSS33Q8NF86 280 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 OR1A1Q9P1Q5 309 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
MSH5-202ENST00000375740 FAM24AA6NFZ4 105 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 MLNRO43193 412 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 CECR9P0C854 216 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
MSH5-202ENST00000375740 CD81P60033 236 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 ZNF146Q15072 292 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 ZNF497Q6ZNH5 498 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 OR8G5Q8NG78 346 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 STARD4Q96DR4 205 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 CABLES2Q9BTV7 478 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 TRAPPC2LQ9UL33 140 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 IFNL4K9M1U5 179 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 SH2D1BO14796 132 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 CEACAM1P13688 526 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 FGF7P21781 194 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 UCP1P25874 307 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 SEM1Q6ZVN7 128 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 PRR18Q8N4B5 295 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 OR13D1Q8NGV5 346 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 NIPSNAP3BQ9BS92 247 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 SIRT7Q9NRC8 400 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 FZR1Q9UM11 496 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 ZFHX4Q86UP3 3567 aa11.78□□□□□ -0.52
MSH5-202ENST00000375740 TMEM210A6NLX4 147 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 ADAM20O43506 726 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 CGAP01215 116 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.52
MSH5-202ENST00000375740 FABP6P51161 128 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 GNMTQ14749 295 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 ZNF826PQ6ZT77 177 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 C11orf53Q8IXP5 236 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 UBALD1Q8TB05 177 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 RAB24Q969Q5 203 aa11.77□□□□□ -0.52
MSH5-202ENST00000375740 ZNF71Q9NQZ8 489 aaPredicted RBP11.77□□□□□ -0.52
MSH5-202ENST00000375740 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.53
MSH5-202ENST00000375740 TM4SF5O14894 197 aa11.77□□□□□ -0.53
MSH5-202ENST00000375740 CEBPDP49716 269 aaPredicted RBP11.77□□□□□ -0.53
MSH5-202ENST00000375740 RAB4BP61018 213 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms