RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 hCG_38984A0A1B0GV85 526 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 ATP6V1FQ16864 119 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 OR2C3Q8N628 320 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 BVESQ8NE79 360 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 NFAM1Q8NET5 270 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-202ENST00000372216 MARVELD3Q96A59 401 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 ABHD14BQ96IU4 210 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
COL4A6-202ENST00000372216 LY6DQ14210 128 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 RFLNBQ8N5W9 214 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 PRNDQ9UKY0 176 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 TMEM241Q24JQ0 296 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 SLC25A47Q6Q0C1 308 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 RGP1Q92546 391 aaPredicted RBP8.46□□□□□ -1.05
COL4A6-202ENST00000372216 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 SYNGR1O43759 233 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 FCGR3AP08637 254 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 VSIG8P0DPA2 414 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 GUK1Q16774 197 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 DCAF12L2Q5VW00 463 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 UBE2DNLQ8IWF7 75 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 ST6GALNAC2Q9UJ37 374 aa8.46□□□□□ -1.05
COL4A6-202ENST00000372216 LTBP1Q14766 1721 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 CTDSPLO15194 276 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-202ENST00000372216 NAT1P18440 290 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 CCKARP32238 428 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 UQCRFS1P47985 274 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 MEOX2P50222 304 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 PDLIM4P50479 330 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF880Q6PDB4 577 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 OR10C1Q96KK4 312 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 ABHD1Q96SE0 405 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 MAP1LC3CQ9BXW4 147 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 RAXQ9Y2V3 346 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 CDRT15L2A8MXV6 281 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 C9JCJ5 164 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 SYNGR2O43760 224 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 ZIC3O60481 467 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 RECKO95980 971 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 SLC6A1P30531 599 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF56Q15929 161 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 CLEC18BQ6UXF7 455 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 SHISA5Q8N114 240 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 SYT8Q8NBV8 401 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 SPSB2Q99619 263 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 K7N7A8 449 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 FCGR2BP31994 310 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-202ENST00000372216 MMP16P51512 607 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 WSB1Q9Y6I7 421 aa8.46□□□□□ -1.06
COL4A6-202ENST00000372216 A0A0U1RQV5 110 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 WDR25Q64LD2 544 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-202ENST00000372216 OR52M1Q8NGK5 317 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 MPDU1O75352 247 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 MPC2O95563 127 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 INHBBP09529 407 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 MRGPRGQ86SM5 289 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 HSF4Q9ULV5 492 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 ADAP1O75689 374 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 KLHDC1Q8N7A1 406 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 SIGLEC12Q96PQ1 595 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 ELOVL5Q9NYP7 299 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 SURF2Q15527 256 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-202ENST00000372216 C3orf36Q3SXR2 165 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 PRSS54Q6PEW0 395 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 WDFY1Q8IWB7 410 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 C11orf94C9JXX5 98 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 PEAR1Q5VY43 1037 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-202ENST00000372216 OR4A5Q8NH83 315 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 LOC105371242A0A075B767 164 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 IGHV3OR16-8A0A075B7F1 116 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM229AB2RXF0 380 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 J3QR06 171 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 CA11O75493 328 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 LIMS1P48059 325 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 NANOS3P60323 173 aaKnown RBP8.45□□□□□ -1.06
COL4A6-202ENST00000372216 CXorf66Q5JRM2 361 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-202ENST00000372216 ADAD2Q8NCV1 583 aaKnown RBP8.45□□□□□ -1.06
COL4A6-202ENST00000372216 OR10D4PQ8NGN7 298 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 VWCEQ96DN2 955 aa8.45□□□□□ -1.06
COL4A6-202ENST00000372216 IGSF23A1L1A6 192 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 RAB29O14966 203 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 EFNB2P52799 333 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 RIGQ13278 110 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM78Q5T7P6 136 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 LAMTOR1Q6IAA8 161 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF680Q8NEM1 530 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 BEX4Q9NWD9 120 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-202ENST00000372216 BET1LQ9NYM9 111 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 PITPNC1Q9UKF7 332 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 EIF3GO75821 320 aaKnown RBP eCLIP8.44□□□□□ -1.06
COL4A6-202ENST00000372216 OR2H2O95918 312 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 SSTR5P35346 364 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 P2RY1P47900 373 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 COMPP49747 757 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-202ENST00000372216 IL24Q13007 206 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 SNAI3Q3KNW1 292 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms