RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZMIZ1Q9ULJ6 1067 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 MOB4Q9Y3A3 225 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 LANCL1O43813 399 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 FCGR3AP08637 254 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 GZMMP51124 257 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 UBE2V2Q15819 145 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 NR2C2APQ86WQ0 139 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 TNFSF18Q9UNG2 199 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 SLC35E4Q6ICL7 350 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 CORTO00230 105 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 TSPAN2O60636 221 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 ZNF253O75346 499 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 Q56UQ5 140 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 FAM214BQ7L5A3 538 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 SLC25A40Q8TBP6 338 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 PRR13Q9NZ81 148 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 SPAG17Q6Q759 2223 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 A0A0J9YW62 118 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 ISG15P05161 165 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 FDX2Q6P4F2 183 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR4F17Q8NGA8 305 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 H3BQ15 152 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 IGLV3-19P01714 112 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 FBLN7Q53RD9 439 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR1L4Q8NGR5 311 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 MRGPRDQ8TDS7 321 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 C10orf35Q96D05 121 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 SMDT1Q9H4I9 107 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 SPCS1Q9Y6A9 102 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 MIA3Q5JRA6 1907 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 MARCH11A6NNE9 402 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 PRSS12P56730 875 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 MGST2Q99735 147 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 CA10Q9NS85 328 aa11.59□□□□□ -0.55
RAPGEF1-201ENST00000372189 MEX3AA1L020 520 aaKnown RBP11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 MEF2CQ06413 473 aaPredicted RBP11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 TMEM167BQ9NRX6 74 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 SYNGR2O43760 224 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 SEC11BP0C7V7 166 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 RPS4Y1P22090 263 aaKnown RBP11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 OPRK1P41145 380 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 NMUP48645 174 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 SNAI3Q3KNW1 292 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 TMEM65Q6PI78 240 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 RARRES2Q99969 163 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 PPP1R3EQ9H7J1 279 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 IGHV3-43A0A0B4J1X8 118 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 LINC00587B1AMM8 73 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 SOCS1O15524 211 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 NTN1O95631 604 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 IGHV3-43DP0DP04 118 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 SVIPQ8NHG7 77 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 ARID1BQ8NFD5 2236 aaPredicted RBP11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 TMEM189A5PLL7 270 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 TRDCB7Z8K6 153 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 C11orf94C9JXX5 98 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 H7C2G1 150 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 P2RY6Q15077 328 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 ZNF385AQ96PM9 386 aaKnown RBP11.58□□□□□ -0.56
RAPGEF1-201ENST00000372189 TNFRSF9Q07011 255 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 ZNF418Q8TF45 676 aaPredicted RBP11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 C1QTNF9BB2RNN3 333 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 EWSR1Q01844 656 aaKnown RBP eCLIP11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 FHL5Q5TD97 284 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 ADAD2Q8NCV1 583 aaKnown RBP11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 ARID2Q68CP9 1835 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 CHST1O43916 411 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 ZNF665Q9H7R5 613 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 A0A1W2PRD5 423 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 A0A1W2PRF3 423 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 A0A1W2PRM7 423 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 SPINK2P20155 84 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 BRS3P32247 399 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 CDCP2Q5VXM1 449 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 ZNF562Q6V9R5 426 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 WNT2BQ93097 391 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 MRPL24Q96A35 216 aaKnown RBP11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 WDR13Q9H1Z4 485 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 GEMIN7Q9H840 131 aaKnown RBP11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 ZNF785A8K8V0 405 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 NAAAQ02083 359 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 MRGPRGQ86SM5 289 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 C1orf174Q8IYL3 243 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 C10orf111Q8N326 155 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 OR1L6Q8NGR2 347 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 SLC52A3Q9NQ40 469 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 ST6GALNAC2Q9UJ37 374 aa11.57□□□□□ -0.56
RAPGEF1-201ENST00000372189 FAM74A7A6NL05 159 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 RBP4P02753 201 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 CD1AP06126 327 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 CXCL2P19875 107 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 VDAC1P21796 283 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 CTAG1AP78358 180 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 ZP4Q12836 540 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 PCOLCEQ15113 449 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 CDIPTO14735 213 aa11.56□□□□□ -0.56
RAPGEF1-201ENST00000372189 ORM1P02763 201 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms