RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 YPEL2Q96QA6 119 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 RIMS4Q9H426 269 aaPredicted RBP11.65□□□□□ -0.54
SF3B5-201ENST00000367569 LINC00527Q9UJ94 153 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 NCBP2LA6PVI3 153 aaKnown RBP11.64□□□□□ -0.55
SF3B5-201ENST00000367569 TRDCB7Z8K6 153 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 CNTFRP26992 372 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 TALDO1P37837 337 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 CEACAM6P40199 344 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 ZNF137PP52743 207 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 Q3ZCU0 254 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 STEAP3Q658P3 488 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 FAM131AQ6UXB0 335 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 C16orf82Q7Z2V1 217 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 C5orf56Q8N8D9 126 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 PTX4Q96A99 478 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 C11orf54Q9H0W9 315 aaPredicted RBP11.64□□□□□ -0.55
SF3B5-201ENST00000367569 RDH8Q9NYR8 311 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
SF3B5-201ENST00000367569 TRAV18A0A075B6X5 111 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 A0A1W2PRX2 142 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 MEIS3P1A6NDR6 274 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 J3QRK9 145 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 LANCL1O43813 399 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 SSX5O60225 188 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 ZBTB25P24278 435 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 RANBP1P43487 201 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 LINC00205P59089 165 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 GNG2P59768 71 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 NSUN5P1Q3KNT7 163 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 Q8N6K4 173 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 DRAXINQ8NBI3 349 aaPredicted RBP11.63□□□□□ -0.55
SF3B5-201ENST00000367569 RITA1Q96K30 269 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 NOL4LQ96MY1 436 aaPredicted RBP11.63□□□□□ -0.55
SF3B5-201ENST00000367569 NABP2Q9BQ15 211 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 MRPS26Q9BYN8 205 aaKnown RBP11.63□□□□□ -0.55
SF3B5-201ENST00000367569 ETV7Q9Y603 341 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 PLXNB1O43157 2135 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
SF3B5-201ENST00000367569 LINC01548A6NM66 108 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 SERPINE3A8MV23 424 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 TXNL1O43396 289 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 FBXO24O75426 580 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 ZNF260Q3ZCT1 412 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 C11orf88Q6PI97 169 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 THNSL2Q86YJ6 484 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 SAMD12Q8N8I0 201 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 OR4A4PQ8NGN8 299 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 OR2T10Q8NGZ9 312 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 ZNF251Q9BRH9 671 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 CABLES2Q9BTV7 478 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 ST6GALNAC5Q9BVH7 336 aa11.62□□□□□ -0.55
SF3B5-201ENST00000367569 G3V4G9 280 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 MOSP00540 346 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 F2RL1P55085 397 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 KIR2DS1Q14954 304 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 MMDQ15546 238 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 KHDC1LQ5JSQ8 128 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 HACD4Q5VWC8 232 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 PHF21AQ96BD5 680 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 C5orf30Q96GV9 206 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 CITED2Q99967 270 aaPredicted RBP11.61□□□□□ -0.55
SF3B5-201ENST00000367569 WNT10AQ9GZT5 417 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 OR2D2Q9H210 308 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 MGAT4AQ9UM21 535 aa11.61□□□□□ -0.55
SF3B5-201ENST00000367569 EIF4EP06730 217 aaKnown RBP11.6□□□□□ -0.55
SF3B5-201ENST00000367569 OR8U9P0C7N5 309 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 CD1BP29016 333 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 GPR12P47775 334 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 EBI3Q14213 229 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 ZNF329Q86UD4 541 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 GVQW1Q8N7I0 195 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 Q8N9W7 124 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 OR10J5Q8NHC4 309 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 EDARADDQ8WWZ3 215 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 S1PR3Q99500 378 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 HSPB9Q9BQS6 159 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 GINS4Q9BRT9 223 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 SPATA2Q9UM82 520 aa11.6□□□□□ -0.55
SF3B5-201ENST00000367569 TRBV6-7A0A0A0MS04 114 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 M0QZK8 103 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 M0R1X1 148 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 RAB29O14966 203 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 GABARAPO95166 117 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 OPN1MWP04001 364 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 GSTP1P09211 210 aaKnown RBP11.59□□□□□ -0.55
SF3B5-201ENST00000367569 CT45A6P0DMU7 189 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 CT45A5P0DMU8 189 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 CT45A7P0DMV0 189 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 OPN1MW2P0DN77 364 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 OPN1MW3P0DN78 364 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 ACTBP60709 375 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 UBE2NLQ5JXB2 153 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 OR5AU1Q8NGC0 362 aa11.59□□□□□ -0.55
SF3B5-201ENST00000367569 WIPF2Q8TF74 440 aaPredicted RBP11.59□□□□□ -0.55
SF3B5-201ENST00000367569 SLC25A46Q96AG3 418 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms