RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 DCAF12L2Q5VW00 463 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 MARVELD1Q9BSK0 173 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 PEBP1P30086 187 aaKnown RBP13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 KBTBD11O94819 623 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 PPP1R17O96001 155 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 CD99P14209 185 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 LGALS3P17931 250 aaKnown RBP13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 ANOS1P23352 680 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 TNFSF10P50591 281 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 DSPPQ9NZW4 1301 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 FCGR2BP31994 310 aaPredicted RBP13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 NUDT3O95989 172 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 GPX1P07203 203 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 CKS2P33552 79 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 DOCK2Q92608 1830 aa13.59□□□□□ -0.23
NUCKS1-201ENST00000367142 MEIG1Q5JSS6 88 aa13.58□□□□□ -0.23
NUCKS1-201ENST00000367142 RTN4RQ9BZR6 473 aa13.58□□□□□ -0.23
NUCKS1-201ENST00000367142 ST6GALNAC2Q9UJ37 374 aa13.58□□□□□ -0.23
NUCKS1-201ENST00000367142 H0Y980 276 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 H7C2G1 150 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 NPFFO15130 113 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 NUTF2P61970 127 aaKnown RBP13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 SGK494Q96LW2 274 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 HDHD3Q9BSH5 251 aaPredicted RBP13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 MYO9BQ13459 2157 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 CELA2AP08217 269 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 MMP9P14780 707 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 IGHV1-69-2A0A0G2JMI3 117 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 LIPFP07098 398 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 ABHD12Q8N2K0 398 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 FOXB2Q5VYV0 432 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 OR4D11Q8NGI4 311 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 TLNRD1Q9H1K6 362 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 IFT22Q9H7X7 185 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 CALYQ9NYX4 217 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 IL36RNQ9UBH0 155 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 TMEM30BQ3MIR4 351 aa13.58□□□□□ -0.24
NUCKS1-201ENST00000367142 B9A039 149 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 CD160O95971 181 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 CA2P00918 260 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 DLX6P56179 175 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 ARF6P62330 175 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 POM121Q96HA1 1249 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 GPR82Q96P67 336 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 CLEC7AQ9BXN2 247 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 PILRBQ9UKJ0 227 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 DTX4Q9Y2E6 619 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 H3BQ15 152 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 M0QZK8 103 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 GGCTO75223 188 aaKnown RBP13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 OR9G1Q8NH87 305 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 ZNF56Q15929 161 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 SCN7AQ01118 1682 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 URB1O60287 2271 aaKnown RBP13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 SEC11BP0C7V7 166 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 NPPCP23582 126 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 MAP1LC3AQ9H492 121 aa13.57□□□□□ -0.24
NUCKS1-201ENST00000367142 C1QAP02745 245 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 STARD6P59095 220 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 LHFPL5Q8TAF8 219 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 PKIBQ9C010 78 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 TRAV8-7A0A075B6U6 113 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 NPIPB11E5RHQ5 1161 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 RBFOX2O43251 390 aaKnown RBP eCLIP13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 RND2P52198 227 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 MFAP2P55001 183 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 SERF2P84101 59 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 C2orf83Q53S99 150 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A10PA6NDY2 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A18PA6NE21 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A16PA6NEW6 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A20PA6NIJ5 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A8PA6NJQ4 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A7PA6NKC0 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A22PA8MWA6 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A12PA8MX19 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A5PA8MXJ8 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A23PA8MXZ1 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 SYNGR3O43761 229 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 SLC25A17O43808 307 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A15PP0C7V4 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A13PP0C7W8 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A14PP0C7W9 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM90A24PP0C7X0 464 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 FCARP24071 287 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 DNM1P46Q6ZS02 220 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 H1FOOQ8IZA3 346 aaPredicted RBP13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 TMEM186Q96B77 213 aa13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 COL25A1Q9BXS0 654 aaPredicted RBP13.56□□□□□ -0.24
NUCKS1-201ENST00000367142 ATP6V0CP27449 155 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 TMEM52Q8NDY8 209 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 TMEM101Q96IK0 257 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 IGHV3OR16-10A0A075B7F0 116 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms