RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 DSCR4P56555 118 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-201ENST00000361909 ASCL5Q7RTU5 278 aa16.2■□□□□ 0.18
CMTM3-201ENST00000361909 ZCCHC14Q8WYQ9 949 aaKnown RBP16.2■□□□□ 0.18
CMTM3-201ENST00000361909 MRPS18CQ9Y3D5 142 aaKnown RBP16.2■□□□□ 0.18
CMTM3-201ENST00000361909 CTXND1A0A1B0GTU2 59 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 SYNGR3O43761 229 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 LIFP15018 202 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 KRTAP27-1Q3LI81 207 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 GPR146Q96CH1 333 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 DOCK10Q96BY6 2186 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 H3BP45 60 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 PGLYRP1O75594 196 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-201ENST00000361909 CBR3O75828 277 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 MMP7P09237 267 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-201ENST00000361909 GNB2P62879 340 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 OR2AE1Q8NHA4 323 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 RPUSD4Q96CM3 377 aaKnown RBP16.19■□□□□ 0.18
CMTM3-201ENST00000361909 MS4A10Q96PG2 267 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 MIEN1Q9BRT3 115 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 RIMS4Q9H426 269 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-201ENST00000361909 PSENENQ9NZ42 101 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 ABI3Q9P2A4 366 aa16.19■□□□□ 0.18
CMTM3-201ENST00000361909 ZNF292O60281 2723 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 IGKV1D-13A0A0B4J2D9 117 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 ZNF816-ZNF321PA0A0X1KG74 233 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 NPIPA2E9PIF3 369 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 NPIPA3F8WFD2 350 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 HPRT1P00492 218 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 GYPAP02724 150 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 SERPINE2P07093 398 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 IGKV1-13P0DP09 117 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 TNFSF10P50591 281 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 PHYHD1Q5SRE7 291 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 OR1F12Q8NHA8 337 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 OR10J5Q8NHC4 309 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 TAF15Q92804 592 aaKnown RBP eCLIP16.18■□□□□ 0.18
CMTM3-201ENST00000361909 ELOVL1Q9BW60 279 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 RBM24Q9BX46 236 aaKnown RBP16.18■□□□□ 0.18
CMTM3-201ENST00000361909 ULBP2Q9BZM5 246 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 CHODLQ9H9P2 273 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 CCL28Q9NRJ3 127 aa16.18■□□□□ 0.18
CMTM3-201ENST00000361909 TNFSF13O75888 250 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 RPL29P47914 159 aaKnown RBP16.17■□□□□ 0.18
CMTM3-201ENST00000361909 RPL15P61313 204 aaKnown RBP16.17■□□□□ 0.18
CMTM3-201ENST00000361909 PPP1CBP62140 327 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 PAFAH1B2P68402 229 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 ANKRD39Q53RE8 183 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 ABHD17BQ5VST6 288 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 PLCXD3Q63HM9 321 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 SAXO1Q8IYX7 474 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 ATP23Q9Y6H3 246 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 hCG_38984A0A1B0GV85 526 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 LCATP04180 440 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 CYB5R2Q6BCY4 276 aa16.17■□□□□ 0.18
CMTM3-201ENST00000361909 NEIL1Q96FI4 390 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-201ENST00000361909 FAM90A26D6RGX4 464 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 NXPH3O95157 252 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 OPN1LWP04000 364 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 TMEM183BQ1AE95 376 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 TEX43Q6ZNM6 134 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 TMEM144Q7Z5S9 345 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 WDYHV1Q96HA8 205 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 DLL3Q9NYJ7 618 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 PXMP4Q9Y6I8 212 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 OR6C6A6NF89 314 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 CD300LBA8K4G0 201 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 SOX8P57073 446 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 ZNF705AQ6ZN79 300 aaPredicted RBP16.16■□□□□ 0.18
CMTM3-201ENST00000361909 ZNF611Q8N823 705 aa16.16■□□□□ 0.18
CMTM3-201ENST00000361909 YLPM1P49750 1951 aaKnown RBP16.16■□□□□ 0.18
CMTM3-201ENST00000361909 A0A0G2JRQ6 117 aa16.15■□□□□ 0.18
CMTM3-201ENST00000361909 IL3RAP26951 378 aa16.15■□□□□ 0.18
CMTM3-201ENST00000361909 MRPS11P82912 194 aaKnown RBP16.15■□□□□ 0.18
CMTM3-201ENST00000361909 FOXL1Q12952 345 aa16.15■□□□□ 0.18
CMTM3-201ENST00000361909 RTP5Q14D33 572 aa16.15■□□□□ 0.18
CMTM3-201ENST00000361909 DAZAP2Q15038 168 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-201ENST00000361909 TBX15Q96SF7 602 aa16.15■□□□□ 0.18
CMTM3-201ENST00000361909 TRAPPC1Q9Y5R8 145 aa16.15■□□□□ 0.18
CMTM3-201ENST00000361909 TRBV6-6A0A0A6YYG2 114 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 ZNF705FA8MVS1 300 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-201ENST00000361909 SLC33A1O00400 549 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-201ENST00000361909 TMPRSS2O15393 492 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 MLNRO43193 412 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 ZIC3O60481 467 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 SCTP09683 121 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 ZNF705DP0CH99 300 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-201ENST00000361909 ZNF705BP0CI00 300 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-201ENST00000361909 ATP6V1FQ16864 119 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 HAPLN4Q86UW8 402 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 RPP25LQ8N5L8 163 aaKnown RBP16.14■□□□□ 0.17
CMTM3-201ENST00000361909 GPR35Q9HC97 309 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 RIF1Q5UIP0 2472 aaKnown RBP16.14■□□□□ 0.17
CMTM3-201ENST00000361909 SOX15O60248 233 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 NPSP0C0P6 89 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 ESDP10768 282 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 SRD5A2P31213 254 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 BRS3P32247 399 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 PCP4P48539 62 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 TPPP2P59282 170 aa16.14■□□□□ 0.17
CMTM3-201ENST00000361909 ARL16Q0P5N6 197 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms