RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 GNMTQ14749 295 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 TATDN3Q17R31 274 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 CCDC58Q4VC31 144 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 FAM131AQ6UXB0 335 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 LFNGQ8NES3 379 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 OR52L2PQ8NGH6 319 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 RGP1Q92546 391 aaPredicted RBP10.56□□□□□ -0.72
VPS29-201ENST00000360579 GALMQ96C23 342 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 CENPNQ96H22 339 aaPredicted RBP10.56□□□□□ -0.72
VPS29-201ENST00000360579 ZNF184Q99676 751 aaPredicted RBP10.56□□□□□ -0.72
VPS29-201ENST00000360579 RNF5Q99942 180 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 THAP7Q9BT49 309 aaPredicted RBP10.56□□□□□ -0.72
VPS29-201ENST00000360579 HIPK2Q9H2X6 1198 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 SIGLEC8Q9NYZ4 499 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 PIPOXQ9P0Z9 390 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 TNCP24821 2201 aa10.56□□□□□ -0.72
VPS29-201ENST00000360579 H3BUA1 57 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 FCN1O00602 326 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 MAS1P04201 325 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 GSTP1P09211 210 aaKnown RBP10.55□□□□□ -0.72
VPS29-201ENST00000360579 RPL22L1Q6P5R6 122 aaKnown RBP10.55□□□□□ -0.72
VPS29-201ENST00000360579 Q96MT0 163 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 RDH12Q96NR8 316 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 FAM103A1Q9BTL3 118 aaKnown RBP10.55□□□□□ -0.72
VPS29-201ENST00000360579 ZNF355PQ9NSJ1 428 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 CKLFQ9UBR5 152 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
VPS29-201ENST00000360579 RAB29O14966 203 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 SLC22A1O15245 554 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 FUT3P21217 361 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 GTF2A1P52655 376 aaPredicted RBP10.54□□□□□ -0.72
VPS29-201ENST00000360579 RNLSQ5VYX0 342 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 IL34Q6ZMJ4 242 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 LINC00322Q6ZN03 302 aaPredicted RBP10.54□□□□□ -0.72
VPS29-201ENST00000360579 POC5Q8NA72 575 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 LINC00476Q8WZB0 136 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 SLC7A6OSQ96CW6 309 aaPredicted RBP10.54□□□□□ -0.72
VPS29-201ENST00000360579 IFI27L2Q9H2X8 130 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 RETNQ9HD89 108 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 GAB2Q9UQC2 676 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 WASHC3Q9Y3C0 194 aa10.54□□□□□ -0.72
VPS29-201ENST00000360579 SAC3D1A6NKF1 404 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 H7C2Y5 167 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 GPX5O75715 221 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 TPPPO94811 219 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 SYNJ2BPP57105 145 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 GLIPR1L1Q6UWM5 242 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 LAX1Q8IWV1 398 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 MRPL30Q8TCC3 161 aaKnown RBP10.53□□□□□ -0.72
VPS29-201ENST00000360579 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 SELENOIQ9C0D9 397 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 ABRACLQ9P1F3 81 aa10.53□□□□□ -0.72
VPS29-201ENST00000360579 METTL1Q9UBP6 276 aaKnown RBP10.53□□□□□ -0.72
VPS29-201ENST00000360579 UBE2QL1A1L167 161 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 ANKRD34BA5PLL1 514 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 RBMY1BA6NDE4 496 aaKnown RBP10.52□□□□□ -0.73
VPS29-201ENST00000360579 RBMY1EA6NEQ0 496 aaKnown RBP10.52□□□□□ -0.73
VPS29-201ENST00000360579 H0YJW9 148 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 SPDEFO95238 335 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 CNIH1O95406 144 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 CA2P00918 260 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 ALPLP05186 524 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 RBMY1DP0C7P1 496 aaKnown RBP10.52□□□□□ -0.73
VPS29-201ENST00000360579 CT45A6P0DMU7 189 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 CT45A5P0DMU8 189 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 CT45A7P0DMV0 189 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 MGMTP16455 207 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 IGFBP3P17936 291 aaPredicted RBP10.52□□□□□ -0.73
VPS29-201ENST00000360579 AADACP22760 399 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 DMKNQ6E0U4 476 aaPredicted RBP10.52□□□□□ -0.73
VPS29-201ENST00000360579 JAGN1Q8N5M9 183 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 OR5AN1Q8NGI8 311 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 GHSRQ92847 366 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 MUL1Q969V5 352 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 CLCC1Q96S66 551 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 TSNAXQ99598 290 aaKnown RBP10.52□□□□□ -0.73
VPS29-201ENST00000360579 SLC2A8Q9NY64 477 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 PEMTQ9UBM1 199 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 SLC23A1Q9UHI7 598 aa10.52□□□□□ -0.73
VPS29-201ENST00000360579 KMT2AQ03164 3969 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 PDCD6O75340 191 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 CRTAPO75718 401 aaPredicted RBP10.51□□□□□ -0.73
VPS29-201ENST00000360579 OR2A4O95047 310 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 BRI3O95415 125 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 LY6G6CO95867 125 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 CSN3P07498 182 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 CD81P60033 236 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 PSG5Q15238 335 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 C6orf141Q5SZD1 244 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 AWAT2Q6E213 333 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 CDH26Q8IXH8 852 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 OR52I1Q8NGK6 324 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 GRPEL2Q8TAA5 225 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 DDB2Q92466 427 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 TMEM68Q96MH6 324 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 PLEKHA3Q9HB20 300 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 AMBNQ9NP70 447 aa10.51□□□□□ -0.73
VPS29-201ENST00000360579 PEF1Q9UBV8 284 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms