RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TRA2AQ13595 282 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 KRTCAP3Q53RY4 240 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 KLHDC9Q8NEP7 349 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 IL36RNQ9UBH0 155 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 FTH1P19P0C7X4 201 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 SRSF5Q13243 272 aaKnown RBP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 ECSCRQ19T08 205 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 TEX29Q8N6K0 151 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 ADAD2Q8NCV1 583 aaKnown RBP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 RBM38Q9H0Z9 239 aaKnown RBP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 CACNA1DQ01668 2161 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 CTLA4P16410 223 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 AGAP20933 346 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 SRIP30626 198 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 ANKRD33Q7Z3H0 272 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 LYZL2Q7Z4W2 148 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 OR2Y1Q8NGV0 311 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 CXorf51AA0A1B0GTR3 108 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 H3BRM9 83 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 CTSVO60911 334 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 CFDP00746 253 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 TMEM95Q3KNT9 176 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 LINC00470Q9BZP3 86 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 SPCS1Q9Y6A9 102 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 NUBP1P53384 320 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 MMDQ15546 238 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 RBKSQ9H477 322 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 TMEM262E9PQX1 116 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 FFAR1O14842 300 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 SRD5A2P31213 254 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 GFERP55789 205 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 LOXL3P58215 753 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 GGACTQ9BVM4 153 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 PCGF1Q9BSM1 259 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 MPDZO75970 2070 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 IGHV3-13P01766 116 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 IGHV3-7P01780 117 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 ZNF324BQ6AW86 544 aaPredicted RBP8.13□□□□□ -1.11
VPS13A-203ENST00000360280 OR2K2Q8NGT1 345 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 CHST5Q9GZS9 411 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 WIPI1Q5MNZ9 446 aaPredicted RBP8.13□□□□□ -1.11
VPS13A-203ENST00000360280 ASB1Q9Y576 335 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 CD3EP07766 207 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 CISD1Q9NZ45 108 aaKnown RBP8.13□□□□□ -1.11
VPS13A-203ENST00000360280 TRAV39A0A0B4J263 110 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 H0Y980 276 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 PRR35P0CG20 571 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 ZNF56Q15929 161 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 ZNF414Q96IQ9 312 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 FOXC2Q99958 501 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 LPAR2Q9HBW0 351 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 RNF7Q9UBF6 113 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 FREM3P0C091 2139 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 AHCTF1Q8WYP5 2266 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 TSPAN2O60636 221 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 PARLQ9H300 379 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 TREM2Q9NZC2 230 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 H7C1H1 209 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 SIGLEC5O15389 551 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 PRICKLE4Q2TBC4 344 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 LAMTOR1Q6IAA8 161 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 CCL2P13500 99 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 FCARP24071 287 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 MDP1Q86V88 176 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 ZNF645Q8N7E2 425 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 F5P12259 2224 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 DPRXA6NFQ7 191 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 FXYD1O00168 92 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 APELAP0DMC3 54 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 TSPOP30536 169 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 ZNF600Q6ZNG1 722 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 CCL28Q9NRJ3 127 aa8.13□□□□□ -1.11
VPS13A-203ENST00000360280 OR2A4O95047 310 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 HBBP68871 147 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 DMRTA1Q5VZB9 504 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 DPH3Q96FX2 82 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 OR2A7Q96R45 310 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 FRRS1LQ9P0K9 344 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 IGLV3-27P01718 113 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 SSPNQ14714 243 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 KCNE1BA0A087WTH5 132 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 RCC1P18754 421 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-203ENST00000360280 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-203ENST00000360280 ELF5Q9UKW6 265 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-203ENST00000360280 CD300CQ08708 224 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 FAM216AQ8WUB2 273 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 GMLQ99445 158 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 MRM2Q9UI43 246 aaKnown RBP8.12□□□□□ -1.11
VPS13A-203ENST00000360280 FAM71F2Q6NXP2 309 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 SOSTQ9BQB4 213 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 NPIPB8E9PQR5 432 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 NPIPB9F8W1W9 429 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 NPIPB7O75200 414 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 LINC00518Q8N0U6 118 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 PGLYRP4Q96LB8 373 aa8.12□□□□□ -1.11
VPS13A-203ENST00000360280 SIPA1L3O60292 1781 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-203ENST00000360280 TMIGD3P0DMS9 266 aaPredicted RBP8.12□□□□□ -1.11
VPS13A-203ENST00000360280 Q5PR19 223 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms