RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 C10orf111Q8N326 155 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 NFAM1Q8NET5 270 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-203ENST00000359759 OR4A5Q8NH83 315 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 FCGR2BP31994 310 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-203ENST00000359759 RPL31P62899 125 aaKnown RBP13.92□□□□□ -0.18
COL18A1-203ENST00000359759 SLC25A53Q5H9E4 307 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 UQCR10Q9UDW1 63 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 TMEM210A6NLX4 147 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 NANOS3P60323 173 aaKnown RBP13.92□□□□□ -0.18
COL18A1-203ENST00000359759 TMEM177Q53S58 311 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 LINC00596Q86U02 117 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 CHST5Q9GZS9 411 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 SRIP30626 198 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 PCP4P48539 62 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 PUSL1Q8N0Z8 303 aaKnown RBP13.91□□□□□ -0.18
COL18A1-203ENST00000359759 PHLDA3Q9Y5J5 127 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 K7N7A8 449 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 HPRT1P00492 218 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 TGFAP01135 160 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 ANOS1P23352 680 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 FAM74A4Q5TZK3 123 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 OR4B1Q8NGF8 309 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 NPIPB6E9PJ23 425 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 ADRA2AP08913 450 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 CX3CL1P78423 397 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 CCL8P80075 99 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 KCNK7Q9Y2U2 307 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 A0A1W2PQD3 144 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 DDTP30046 118 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 ZNF385AQ96PM9 386 aaKnown RBP13.91□□□□□ -0.18
COL18A1-203ENST00000359759 ELF5Q9UKW6 265 aaPredicted RBP13.91□□□□□ -0.18
COL18A1-203ENST00000359759 SIRT4Q9Y6E7 314 aaPredicted RBP13.91□□□□□ -0.18
COL18A1-203ENST00000359759 ARL14EPLP0DKL9 152 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 LEMD1Q68G75 181 aa13.91□□□□□ -0.18
COL18A1-203ENST00000359759 HKR1P10072 659 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 ZNF714Q96N38 554 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 ZDHHC8Q9ULC8 765 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 CACNA1SQ13698 1873 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 CXCL10P02778 98 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 PF4V1P10720 104 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 EPHA8P29322 1005 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-203ENST00000359759 SMAGPQ0VAQ4 97 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
COL18A1-203ENST00000359759 SLC25A34Q6PIV7 304 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 BIVMQ86UB2 503 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 ZBTB34Q8NCN2 500 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 TIMP4Q99727 224 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 C1QCP02747 245 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 SRSF12Q8WXF0 261 aaKnown RBP13.9□□□□□ -0.18
COL18A1-203ENST00000359759 LRRC3BQ96PB8 259 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 RHBDD2Q6NTF9 364 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 C1orf210Q8IVY1 113 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 ZNF645Q8N7E2 425 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 OR52M1Q8NGK5 317 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 PLAC1Q9HBJ0 212 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 ZNF107Q9UII5 783 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-203ENST00000359759 DTX4Q9Y2E6 619 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 ARF6P62330 175 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 WNT16Q9UBV4 365 aa13.9□□□□□ -0.18
COL18A1-203ENST00000359759 PPIAL4EA0A075B759 164 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 CENPVL1A0A0U1RR11 272 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 PPIAL4DF5H284 164 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 PPIAL4FP0DN26 164 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 NXPH1P58417 271 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 ZNF273Q14593 569 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 CXorf66Q5JRM2 361 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-203ENST00000359759 PPIAL4AQ9Y536 164 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 TRIP11Q15643 1979 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 DRD3P35462 400 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 TBL2Q9Y4P3 447 aaKnown RBP13.89□□□□□ -0.19
COL18A1-203ENST00000359759 BTAF1O14981 1849 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 A0A1W2PP11 408 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 PMCHL1Q16048 86 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 ZNF600Q6ZNG1 722 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 C10orf126Q8N4M7 172 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 COX14Q96I36 57 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 LINC00470Q9BZP3 86 aa13.89□□□□□ -0.19
COL18A1-203ENST00000359759 HSPB1P04792 205 aaKnown RBP13.88□□□□□ -0.19
COL18A1-203ENST00000359759 FOLR2P14207 255 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 OR4D5Q8NGN0 318 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 LEAP2Q969E1 77 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 SNAI2O43623 268 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 IGKV3-20P01619 116 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 RPL27AP46776 148 aaKnown RBP13.88□□□□□ -0.19
COL18A1-203ENST00000359759 IRF3Q14653 427 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 GPR82Q96P67 336 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 OPN3Q9H1Y3 402 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-203ENST00000359759 TMEM160Q9NX00 188 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 C9orf40Q8IXQ3 194 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 SCNM1Q9BWG6 230 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 ZNF56Q15929 161 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 GAB4Q2WGN9 574 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 FOXJ2Q9P0K8 574 aa13.88□□□□□ -0.19
COL18A1-203ENST00000359759 A0A0B4J293 547 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 IGHV3-48P01763 117 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 B4E171 279 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 UPK3AO75631 287 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 CACNG7P62955 275 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 NUDT10Q8NFP7 164 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms