RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
LDLRAD4-201ENST00000359446 FAM74A7A6NL05 159 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 OGG1O15527 345 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 CLPPQ16740 277 aaPredicted RBP11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 GFRA1P56159 465 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 SMRP1Q8NCR6 262 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 OR8G5Q8NG78 346 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 HSF4Q9ULV5 492 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 LRRK1Q38SD2 2015 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 RPL36A-HNRNPH2H7BZ11 118 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 WIPI2Q9Y4P8 454 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 A6NJY4 79 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 EID2BQ96D98 161 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 IL19Q9UHD0 177 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 CD99P14209 185 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 PIMREGQ9BSJ6 248 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 RALYQ9UKM9 306 aaKnown RBP11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 C9orf40Q8IXQ3 194 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 CCL13Q99616 98 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
LDLRAD4-201ENST00000359446 NUDT3O95989 172 aa11.08□□□□□ -0.63
LDLRAD4-201ENST00000359446 CALHM1Q8IU99 346 aa11.08□□□□□ -0.63
LDLRAD4-201ENST00000359446 C1orf174Q8IYL3 243 aa11.08□□□□□ -0.63
LDLRAD4-201ENST00000359446 NAT2P11245 290 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 C11orf91Q3C1V1 193 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 ABHD14BQ96IU4 210 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 HDHD3Q9BSH5 251 aaPredicted RBP11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 CA11O75493 328 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 MRPL24Q96A35 216 aaKnown RBP11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 TCRBV16S1A1N1A0A5B0 115 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 TMEM189A5PLL7 270 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 CXCL3P19876 107 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 TIMP4Q99727 224 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 IGHV3-72A0A0B4J1Y9 119 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 CKS2P33552 79 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 FAM216AQ8WUB2 273 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 METTL1Q9UBP6 276 aaKnown RBP11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 SHISA5Q8N114 240 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 COL18A1P39060 1754 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 H3BQ15 152 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 MFAP2P55001 183 aa11.08□□□□□ -0.64
LDLRAD4-201ENST00000359446 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.642e-7■■□□□ 11.4
LDLRAD4-201ENST00000359446 TRAV8-7A0A075B6U6 113 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 PITX3O75364 302 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 UQCRFS1P47985 274 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 ZNF658BQ4V348 819 aaPredicted RBP11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 TEX29Q8N6K0 151 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 LIMS2Q7Z4I7 341 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 STPG3Q8N7X2 389 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 SBF1O95248 1867 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 NPVFQ9HCQ7 196 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 MEOX2P50222 304 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 STPG1Q5TH74 334 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 LAMTOR1Q6IAA8 161 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 TPRX1Q8N7U7 411 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 BVESQ8NE79 360 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 OPN3Q9H1Y3 402 aaPredicted RBP11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 MRPS18BQ9Y676 258 aaKnown RBP11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 MPDU1O75352 247 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 OR10J1P30954 320 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 UCP2P55851 309 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 HCP5Q6MZN7 132 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 WDFY1Q8IWB7 410 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 OR4D11Q8NGI4 311 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 ZNF488Q96MN9 340 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 GLI3P10071 1580 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 CA2P00918 260 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 HOXA6P31267 233 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 RBM11P57052 281 aaKnown RBP11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 SLC16A13Q7RTY0 426 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 PARP14Q460N5 1801 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 SPINT1O43278 529 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 CDS2O95674 445 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 HPRT1P00492 218 aa11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 RGP1Q92546 391 aaPredicted RBP11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 ZNF107Q9UII5 783 aaPredicted RBP11.07□□□□□ -0.64
LDLRAD4-201ENST00000359446 IGF2P01344 180 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 COX6CP09669 75 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 OR4B1Q8NGF8 309 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 SIRT7Q9NRC8 400 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 IL36RNQ9UBH0 155 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 ACAA1P09110 424 aaPredicted RBP11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 CACNA1EQ15878 2313 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 GPR61Q9BZJ8 451 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 HBZP02008 142 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 RPL27AP46776 148 aaKnown RBP11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 PLPPR5Q32ZL2 321 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 RAB33BQ9H082 229 aa11.06□□□□□ -0.64
LDLRAD4-201ENST00000359446 OVCH2Q7RTZ1 564 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms