RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 OR13A1Q8NGR1 328 aa12.45□□□□□ -0.42
GABPB1-202ENST00000359031 LRRC46Q96FV0 321 aa12.45□□□□□ -0.42
GABPB1-202ENST00000359031 MS4A7Q9GZW8 240 aaPredicted RBP12.45□□□□□ -0.42
GABPB1-202ENST00000359031 CACNG5Q9UF02 275 aa12.45□□□□□ -0.42
GABPB1-202ENST00000359031 ZNF835Q9Y2P0 537 aa12.45□□□□□ -0.42
GABPB1-202ENST00000359031 KIAA1324LA8MWY0 1029 aaPredicted RBP12.44□□□□□ -0.42
GABPB1-202ENST00000359031 C15orf65H3BRN8 121 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 ATG12O94817 140 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 TMEM50AO95807 157 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 FAM87AP0C7U9 286 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 SFTPCP11686 197 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 SSTR5P35346 364 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 C10orf91Q5T1B1 145 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 STX12Q86Y82 276 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 CISD2Q8N5K1 135 aaKnown RBP12.44□□□□□ -0.42
GABPB1-202ENST00000359031 ITLN1Q8WWA0 313 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 COA4Q9NYJ1 87 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
GABPB1-202ENST00000359031 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 FAM90A26D6RGX4 464 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 TRIM77I1YAP6 450 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 SPRY3O43610 288 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 LHBP01229 141 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 PAX9P55771 341 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 DEFA5Q01523 94 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 EDDM3AQ14507 147 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 CLINT1Q14677 625 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 CR1LQ2VPA4 569 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 TMEM108Q6UXF1 575 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 ODF3L1Q8IXM7 274 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 SVBPQ8N300 66 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.44□□□□□ -0.42
GABPB1-202ENST00000359031 HSD17B11Q8NBQ5 300 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 OR5C1Q8NGR4 320 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 TSNAXQ99598 290 aaKnown RBP12.44□□□□□ -0.42
GABPB1-202ENST00000359031 MRPL37Q9BZE1 423 aaKnown RBP12.44□□□□□ -0.42
GABPB1-202ENST00000359031 NCOR1P1Q9H4R4 102 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 TREM1Q9NP99 234 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 COQ3Q9NZJ6 369 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 CACFD1Q9UGQ2 172 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 MMP24Q9Y5R2 645 aa12.44□□□□□ -0.42
GABPB1-202ENST00000359031 SPTA1P02549 2419 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 ODAMA1E959 279 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 C16orf97H3BN30 126 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 TXNL1O43396 289 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 DFFBO76075 338 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 NXPH3O95157 252 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 MUC1P15941 1255 aaPredicted RBP12.43□□□□□ -0.42
GABPB1-202ENST00000359031 ADCYAP1P18509 176 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 GZMHP20718 246 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 TNFSF4P23510 183 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
GABPB1-202ENST00000359031 CAMLGP49069 296 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 DYNLT3P51808 116 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 BTN1A1Q13410 526 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 ZNF66Q6ZN08 573 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 Q6ZRM9 215 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 C17orf50Q8WW18 174 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 EDARADDQ8WWZ3 215 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 C5orf30Q96GV9 206 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 ATP5SQ99766 215 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 SH3BGRL3Q9H299 93 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 UQCC1Q9NVA1 299 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 JKAMPQ9P055 326 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 IL19Q9UHD0 177 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 JPT1Q9UK76 154 aa12.43□□□□□ -0.42
GABPB1-202ENST00000359031 PRR14LQ5THK1 2151 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 SVILO95425 2214 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 UMAD1C9J7I0 102 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 SYNGR2O43760 224 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 OMGP23515 440 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 PTAFRP25105 342 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 SULT1A1P50225 295 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 TAS2R30P59541 319 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
GABPB1-202ENST00000359031 AKR1C1Q04828 323 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 ZNF808Q8N4W9 903 aaPredicted RBP12.42□□□□□ -0.42
GABPB1-202ENST00000359031 TPRX1Q8N7U7 411 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 GNPNAT1Q96EK6 184 aaPredicted RBP12.42□□□□□ -0.42
GABPB1-202ENST00000359031 SEC11CQ9BY50 192 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 NKX6-2Q9C056 277 aaPredicted RBP12.42□□□□□ -0.42
GABPB1-202ENST00000359031 C19orf12Q9NSK7 152 aa12.42□□□□□ -0.42
GABPB1-202ENST00000359031 KIAA2026Q5HYC2 2103 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 F8W036 122 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 K7N7A8 449 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 TOR1AO14656 332 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 CST7O76096 145 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 TSPAN15O95858 294 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 IGHV1-46P01743 117 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 PRH1P02810 166 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 ATP6V0CP27449 155 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 ASCL1P50553 236 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 DVL1P1P54792 670 aaPredicted RBP12.41□□□□□ -0.42
GABPB1-202ENST00000359031 TNFAIP6P98066 277 aaPredicted RBP12.41□□□□□ -0.42
GABPB1-202ENST00000359031 TLE1Q04724 770 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 RBPJQ06330 500 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 SPRNQ5BIV9 151 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 ATRAIDQ6UW56 229 aa12.41□□□□□ -0.42
GABPB1-202ENST00000359031 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms