RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 C5orf67F2Z3F1 127 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 ADAP1O75689 374 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 ZFPL1O95159 310 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 TDGF1P13385 188 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 ST3GAL2Q16842 350 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 ZBTB34Q8NCN2 500 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 SMRP1Q8NCR6 262 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 PRELID3AQ96N28 172 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 C9JCJ5 164 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 PPYP01298 95 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 CCL3P10147 92 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 TNFSF10P50591 281 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 LSM10Q969L4 123 aaKnown RBP8.87□□□□□ -0.99
CLIP1-202ENST00000358808 OR2V2Q96R30 315 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 WNT5BQ9H1J7 359 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 HSF4Q9ULV5 492 aa8.87□□□□□ -0.99
CLIP1-202ENST00000358808 C17orf51A8MQB3 221 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 TMEM229AB2RXF0 380 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 M0QZK8 103 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 GFRA3O60609 400 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 GGCTO75223 188 aaKnown RBP8.86□□□□□ -0.99
CLIP1-202ENST00000358808 DXOO77932 396 aaKnown RBP8.86□□□□□ -0.99
CLIP1-202ENST00000358808 MALP21145 153 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 PLP1P60201 277 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 FAM74A3Q4VXF1 159 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 AWAT1Q58HT5 328 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 STPG1Q5TH74 334 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 OR10AC1Q8NH08 325 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 YAE1D1Q9NRH1 226 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 KLK8O60259 260 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 MFAP2P55001 183 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 ERASQ7Z444 233 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 ZNF383Q8NA42 475 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 NUBPLQ8TB37 319 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 EEF1AKMT3Q96AZ1 226 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 HDHD3Q9BSH5 251 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-202ENST00000358808 IL19Q9UHD0 177 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 POLR2AP24928 1970 aaKnown RBP8.86□□□□□ -0.99
CLIP1-202ENST00000358808 A0A087X0M5 115 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 A0A1B0GX30 115 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 PATE3B3GLJ2 98 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 MC5RP33032 325 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 SSTR5P35346 364 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 FAM159AQ6UWV7 190 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 PGLYRP4Q96LB8 373 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 KCNK17Q96T54 332 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 NPFFR1Q9GZQ6 430 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 OPN4Q9UHM6 478 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 C7orf71A4D174 169 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 LIPT2A6NK58 231 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 SOCS1O15524 211 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 OR2A4O95047 310 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 HPRT1P00492 218 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 HIST1H1AQ02539 215 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-202ENST00000358808 C12orf73Q69YU5 71 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 OR2A7Q96R45 310 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 KIR2DL4Q99706 377 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 TOMM7Q9P0U1 55 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 RCC2Q9P258 522 aaKnown RBP8.86□□□□□ -0.99
CLIP1-202ENST00000358808 TRPM7Q96QT4 1865 aa8.86□□□□□ -0.99
CLIP1-202ENST00000358808 NKX2-6A6NCS4 301 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 A8MWL6 223 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 B4E171 279 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 CEACAM4O75871 244 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 EWSR1Q01844 656 aaKnown RBP eCLIP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 RELQ04864 619 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 INSL4Q14641 139 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 KIAA0100Q14667 2235 aaKnown RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 VGLL1Q99990 258 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 TBL2Q9Y4P3 447 aaKnown RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 F11RQ9Y624 299 aaKnown RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 IGHV5-10-1A0A0J9YXX1 117 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 RPL36A-HNRNPH2H7BZ11 118 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 LSM6P62312 80 aaKnown RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 DCAF12L2Q5VW00 463 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 TPRX1Q8N7U7 411 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 SLC6A13Q9NSD5 602 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 TMEFF2Q9UIK5 374 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 NUP205Q92621 2012 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 LOC105371242A0A075B767 164 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 B4DEV8 164 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 DLL1O00548 723 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 TMEM50BP56557 158 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 C21orf62-AS1Q17RA5 79 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 GAB4Q2WGN9 574 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 XAF1Q6GPH4 301 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 PRSS42Q7Z5A4 293 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 DUSP15Q9H1R2 295 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 SIRT7Q9NRC8 400 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 IL36RNQ9UBH0 155 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 HOXD4P09016 255 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 C10orf128Q5T292 105 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 ZNF324BQ6AW86 544 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-202ENST00000358808 AMER3Q8N944 861 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 C10orf35Q96D05 121 aa8.85□□□□□ -0.99
CLIP1-202ENST00000358808 TLNRD1Q9H1K6 362 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms