RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 LYPD6Q86Y78 171 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 ZNF440Q8IYI8 595 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 BATF2Q8N1L9 274 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 ASB5Q8WWX0 329 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 NEUROG1Q92886 237 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 NUDT16L1Q9BRJ7 211 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 TM2D1Q9BX74 207 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 OR51I2Q9H344 312 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 MED13Q9UHV7 2174 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 IGHV5-10-1A0A0J9YXX1 117 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 HSPB2A8KAH6 182 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 OMGP23515 440 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 GPR6P46095 362 aaPredicted RBP7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 LHX2P50458 406 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 HSPB2Q16082 182 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 PLPPR5Q32ZL2 321 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 MPV17L2Q567V2 206 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 WDR82Q6UXN9 313 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 CDC20BQ86Y33 519 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 OR2Y1Q8NGV0 311 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 C16orf52Q8NHV5 167 aa7.97□□□□□ -1.13
SMARCAL1-202ENST00000358207 A0A0U1RQK1 487 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 IGSF23A1L1A6 192 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 ALG1L2C9J202 215 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 CDIPTO14735 213 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 LMX1BO60663 402 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 IGKV1D-16P01601 117 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 H2BFMP0C1H6 154 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 KITLGP21583 273 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 MTCP1P56278 107 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 CKS1BP61024 79 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 VASH2Q86V25 355 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 OR4C3Q8NH37 302 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 SDF2Q99470 211 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 STRADBQ9C0K7 418 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 WDR76Q9H967 626 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 TBL2Q9Y4P3 447 aaKnown RBP7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 ZZEF1O43149 2961 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 SCRG1O75711 98 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 RAD51DO75771 328 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 MT-CO2P00403 227 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 MGAT2Q10469 447 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 SP6Q3SY56 376 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 DCST2Q5T1A1 773 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 MRPL2Q5T653 305 aaKnown RBP7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 FAM78BQ5VT40 261 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 MRPL21Q7Z2W9 205 aaKnown RBP7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 DPY19L4Q7Z388 723 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 OR8I2Q8N0Y5 310 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 PNKDQ8N490 385 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 ARHGEF39Q8N4T4 335 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 LMF2Q9BU23 707 aaKnown RBP7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 B3GALT5Q9Y2C3 310 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 FREM3P0C091 2139 aa7.96□□□□□ -1.14
SMARCAL1-202ENST00000358207 DOCK11Q5JSL3 2073 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 CEBPZOSA8MTT3 80 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 NPIPB7O75200 414 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 NDUFB2O95178 105 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 HBE1P02100 147 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 FBLP22087 321 aaKnown RBP7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 QRFPP83859 136 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 C1orf100Q5SVJ3 147 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 ZNF501Q96CX3 271 aaPredicted RBP7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 SAMD10Q9BYL1 202 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 SRA1Q9HD15 236 aaKnown RBP7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 LYRM4Q9HD34 91 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 ANAPC10Q9UM13 185 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 PHF3Q92576 2039 aaKnown RBP7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 A0A0A6YYD4 124 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 TRAV1-1A0A0B4J248 108 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 ZNF732B4DXR9 585 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 EMDP50402 254 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 MFGE8Q08431 387 aaPredicted RBP7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 GNMTQ14749 295 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 ZNF726P1Q15940 193 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 PLAC9Q5JTB6 97 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 DNM1P34Q6PK57 102 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 LCN15Q6UWW0 184 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 LYZL2Q7Z4W2 148 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 ODF3L1Q8IXM7 274 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 OR4P4Q8NGL7 312 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 CACNG8Q8WXS5 425 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 SLC25A44Q96H78 314 aaPredicted RBP7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 DHDHQ9UQ10 334 aa7.95□□□□□ -1.14
SMARCAL1-202ENST00000358207 ARHGAP21Q5T5U3 1957 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 FAM166BA8MTA8 275 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 GPX1P07203 203 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 VSIG8P0DPA2 414 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 CD99P14209 185 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 SRP14P37108 136 aaKnown RBP7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 WDR74Q6RFH5 385 aaPredicted RBP7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 DEFB125Q8N687 156 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 NXF5Q9H1B4 397 aaKnown RBP7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 MTHFD2LQ9H903 347 aaPredicted RBP7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 THYN1Q9P016 225 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 C19orf53Q9UNZ5 99 aaPredicted RBP7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 DOCK7Q96N67 2140 aa7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 ANKRD11Q6UB99 2663 aaPredicted RBP7.94□□□□□ -1.14
SMARCAL1-202ENST00000358207 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms