RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SAA4P35542 130 aa20.59■□□□□ 0.89
SSBP3-202ENST00000357475 Q3ZCU0 254 aa20.59■□□□□ 0.89
SSBP3-202ENST00000357475 LHFPL1Q86WI0 220 aa20.59■□□□□ 0.89
SSBP3-202ENST00000357475 LYG1Q8N1E2 194 aa20.59■□□□□ 0.89
SSBP3-202ENST00000357475 LINC00311Q8N616 119 aa20.59■□□□□ 0.89
SSBP3-202ENST00000357475 C8orf31Q8N9H6 132 aa20.59■□□□□ 0.89
SSBP3-202ENST00000357475 OR6F1Q8NGZ6 308 aa20.59■□□□□ 0.89
SSBP3-202ENST00000357475 BTCP35070 178 aa20.58■□□□□ 0.89
SSBP3-202ENST00000357475 PRRX1P54821 245 aa20.58■□□□□ 0.89
SSBP3-202ENST00000357475 ARRDC1Q8N5I2 433 aa20.58■□□□□ 0.89
SSBP3-202ENST00000357475 OR10X1Q8NGY0 326 aa20.58■□□□□ 0.89
SSBP3-202ENST00000357475 NANPQ8TBE9 248 aa20.58■□□□□ 0.89
SSBP3-202ENST00000357475 EDARADDQ8WWZ3 215 aa20.58■□□□□ 0.89
SSBP3-202ENST00000357475 BORCS5Q969J3 196 aa20.58■□□□□ 0.89
SSBP3-202ENST00000357475 BUB1B-PAK6H3BSN5 160 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 TMEM17Q86X19 198 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 BCL6BQ8N143 479 aaPredicted RBP20.58■□□□□ 0.88
SSBP3-202ENST00000357475 DYNAPQ8N1N2 210 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 OR13C8Q8NGS7 320 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 C22orf15Q8WYQ4 148 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 TOMM40LQ969M1 308 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 MOB3AQ96BX8 217 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 OR2D2Q9H210 308 aa20.58■□□□□ 0.88
SSBP3-202ENST00000357475 DISC1C4P0D8 188 aa20.57■□□□□ 0.88
SSBP3-202ENST00000357475 LY6LH3BQJ8 138 aa20.57■□□□□ 0.88
SSBP3-202ENST00000357475 ITGB1BP1O14713 200 aa20.57■□□□□ 0.88
SSBP3-202ENST00000357475 IGLV2-14P01704 120 aa20.57■□□□□ 0.88
SSBP3-202ENST00000357475 RPL39P5Q59GN2 51 aa20.57■□□□□ 0.88
SSBP3-202ENST00000357475 SECTM1Q8WVN6 248 aa20.57■□□□□ 0.88
SSBP3-202ENST00000357475 RBMXL1Q96E39 390 aaKnown RBP20.57■□□□□ 0.88
SSBP3-202ENST00000357475 NUP50Q9UKX7 468 aa20.57■□□□□ 0.88
SSBP3-202ENST00000357475 RBM7Q9Y580 266 aaKnown RBP20.57■□□□□ 0.88
SSBP3-202ENST00000357475 SAA2-SAA4A0A096LPE2 208 aa20.56■□□□□ 0.88
SSBP3-202ENST00000357475 PROP1O75360 226 aa20.56■□□□□ 0.88
SSBP3-202ENST00000357475 SAA2P0DJI9 122 aaPredicted RBP20.56■□□□□ 0.88
SSBP3-202ENST00000357475 CCR6P51684 374 aa20.56■□□□□ 0.88
SSBP3-202ENST00000357475 LUMP51884 338 aaPredicted RBP20.56■□□□□ 0.88
SSBP3-202ENST00000357475 HERV-K104P61576 105 aa20.56■□□□□ 0.88
SSBP3-202ENST00000357475 BAMBIQ13145 260 aa20.56■□□□□ 0.88
SSBP3-202ENST00000357475 C16orf87Q6PH81 154 aa20.56■□□□□ 0.88
SSBP3-202ENST00000357475 ZNF251Q9BRH9 671 aa20.56■□□□□ 0.88
SSBP3-202ENST00000357475 A0A0U1RQK1 487 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 LYRM1O43325 122 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 HTR1DP28221 377 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 FAUP35544 74 aaKnown RBP20.55■□□□□ 0.88
SSBP3-202ENST00000357475 REG1BP48304 166 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 LINC00205P59089 165 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 IDO2Q6ZQW0 420 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 ST6GALNAC6Q969X2 333 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 GPHA2Q96T91 129 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 CCL28Q9NRJ3 127 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 HIVEP2P31629 2446 aa20.55■□□□□ 0.88
SSBP3-202ENST00000357475 EPHA1P21709 976 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 RAB7AP51149 207 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 MIDNQ504T8 468 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 TERB2Q8NHR7 220 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 SLC5A7Q9GZV3 580 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 SDHAF2Q9NX18 166 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 SLC2A8Q9NY64 477 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 HILPDAQ9Y5L2 63 aa20.54■□□□□ 0.88
SSBP3-202ENST00000357475 NSD1Q96L73 2696 aaPredicted RBP20.54■□□□□ 0.88
SSBP3-202ENST00000357475 MDFIC2A0A1B0GVS7 189 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 INAFM1C9JVW0 142 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 HSD17B6O14756 317 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 LGALS4P56470 323 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 ASAH1Q13510 395 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 DRAM1Q8N682 238 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 DEDD2Q8WXF8 326 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 TMEM160Q9NX00 188 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 DPM3Q9P2X0 92 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 PI3P19957 117 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 GPR12P47775 334 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 ZNF137PP52743 207 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 SSX2Q16385 188 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 TPTE2P1Q5T6R2 138 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 ZNF818PQ6ZRF7 136 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 MARCH1Q8TCQ1 289 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 PRRT1Q99946 306 aa20.53■□□□□ 0.88
SSBP3-202ENST00000357475 MTORP42345 2549 aa20.52■□□□□ 0.88
SSBP3-202ENST00000357475 GNRHRP30968 328 aa20.52■□□□□ 0.87
SSBP3-202ENST00000357475 PLA1AQ53H76 456 aa20.52■□□□□ 0.87
SSBP3-202ENST00000357475 ZNF833PQ6ZTB9 187 aa20.52■□□□□ 0.87
SSBP3-202ENST00000357475 ZNF645Q8N7E2 425 aa20.52■□□□□ 0.87
SSBP3-202ENST00000357475 C7orf50Q9BRJ6 194 aaKnown RBP20.52■□□□□ 0.87
SSBP3-202ENST00000357475 ZNF221Q9UK13 617 aa20.52■□□□□ 0.87
SSBP3-202ENST00000357475 TBL2Q9Y4P3 447 aaKnown RBP20.52■□□□□ 0.87
SSBP3-202ENST00000357475 AMMECR1Q9Y4X0 333 aaPredicted RBP20.52■□□□□ 0.87
SSBP3-202ENST00000357475 LEUTXA8MZ59 168 aa20.51■□□□□ 0.87
SSBP3-202ENST00000357475 RAB29O14966 203 aa20.51■□□□□ 0.87
SSBP3-202ENST00000357475 SRP14P37108 136 aaKnown RBP20.51■□□□□ 0.87
SSBP3-202ENST00000357475 MINOS1Q5TGZ0 78 aa20.51■□□□□ 0.87
SSBP3-202ENST00000357475 DRAXINQ8NBI3 349 aaPredicted RBP20.51■□□□□ 0.87
SSBP3-202ENST00000357475 MS4A7Q9GZW8 240 aaPredicted RBP20.51■□□□□ 0.87
SSBP3-202ENST00000357475 PIPOXQ9P0Z9 390 aa20.51■□□□□ 0.87
SSBP3-202ENST00000357475 SCP2D1Q9UJQ7 156 aa20.51■□□□□ 0.87
SSBP3-202ENST00000357475 MINOS1-NBL1R4GNA1 71 aa20.51■□□□□ 0.87
SSBP3-202ENST00000357475 CUBNO60494 3623 aa20.5■□□□□ 0.87
SSBP3-202ENST00000357475 NAP1L6A6NFF2 107 aa20.5■□□□□ 0.87
SSBP3-202ENST00000357475 TNFSF12O43508 249 aa20.5■□□□□ 0.87
SSBP3-202ENST00000357475 RTN4IP1Q8WWV3 396 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms