RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZIC3O60481 467 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 CD99P14209 185 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 GZMHP20718 246 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 CDKN2AP42771 156 aaKnown RBP15.08■□□□□ 0
COL27A1-201ENST00000356083 ZNF707Q96C28 371 aaPredicted RBP15.08■□□□□ 0
COL27A1-201ENST00000356083 OPN3Q9H1Y3 402 aaPredicted RBP15.08■□□□□ 0
COL27A1-201ENST00000356083 ZFPL1O95159 310 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 AMER3Q8N944 861 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 CCL28Q9NRJ3 127 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 HSPB7Q9UBY9 170 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 MED13Q9UHV7 2174 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 TRAV12-3A0A0B4J271 114 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 NRTNQ99748 197 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 Q9N2K0 584 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 COPS9Q8WXC6 57 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 TOGARAM1Q9Y4F4 1720 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 FOCADQ5VW36 1801 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 TMEM170BQ5T4T1 132 aa15.08■□□□□ 0
COL27A1-201ENST00000356083 CTSVO60911 334 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 OR2A4O95047 310 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 ATP5G2Q06055 141 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 FAM159AQ6UWV7 190 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 OR2A7Q96R45 310 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 LINC00470Q9BZP3 86 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 RASL10BQ96S79 203 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 C2orf88Q9BSF0 95 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 MPC1Q9Y5U8 109 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 GP1BAP07359 652 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 FOXL2P58012 376 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 ZNF275Q9NSD4 429 aaPredicted RBP15.07■□□□□ 0
COL27A1-201ENST00000356083 IL36RNQ9UBH0 155 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 STPG3Q8N7X2 389 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 LEAP2Q969E1 77 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 WBP1LQ9NX94 342 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 WNT16Q9UBV4 365 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 SCMH1Q96GD3 660 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 IGHV5-10-1A0A0J9YXX1 117 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 CTAG2O75638 210 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 MPC2O95563 127 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 MGAT2Q10469 447 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 NUBPLQ8TB37 319 aa15.07■□□□□ 0
COL27A1-201ENST00000356083 ANOS1P23352 680 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 PRDX2P32119 198 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 C1orf185Q5T7R7 199 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 ASB10Q8WXI3 467 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 TRBV7-9A0A0J9YWB2 115 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 MMP9P14780 707 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 HLA-DRB3P79483 266 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 SSBP1Q04837 148 aaKnown RBP15.06■□□□□ 0
COL27A1-201ENST00000356083 DCAF12L2Q5VW00 463 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 CA10Q9NS85 328 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 VAX2Q9UIW0 290 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 OR6X1Q8NH79 312 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 ZNF488Q96MN9 340 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 ALX3O95076 343 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 CCL3P10147 92 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 ZG16BQ96DA0 208 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 DUX3Q96PT4 197 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 TMEM160Q9NX00 188 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 TET1Q8NFU7 2136 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 MBPP02686 304 aaPredicted RBP15.06■□□□□ 0
COL27A1-201ENST00000356083 SLC16A13Q7RTY0 426 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 H3BTX0 84 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 C10orf128Q5T292 105 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 STPG1Q5TH74 334 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 CBLN3Q6UW01 205 aa15.06■□□□□ 0
COL27A1-201ENST00000356083 NKG7Q16617 165 aa15.05■□□□□ 0
COL27A1-201ENST00000356083 OR5AN1Q8NGI8 311 aa15.05■□□□□ 0
COL27A1-201ENST00000356083 OR2W1Q9Y3N9 320 aa15.05■□□□□ 0
COL27A1-201ENST00000356083 ZNF646O15015 1829 aaPredicted RBP15.05■□□□□ 0
COL27A1-201ENST00000356083 C10orf126Q8N4M7 172 aa15.05■□□□□ 0
COL27A1-201ENST00000356083 NUTF2P61970 127 aaKnown RBP15.05■□□□□ -0
COL27A1-201ENST00000356083 OPN4Q9UHM6 478 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 CYB5R3P00387 301 aaPredicted RBP15.05■□□□□ -0
COL27A1-201ENST00000356083 CDC20Q12834 499 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 MAP1LC3AQ9H492 121 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 S4R3C0 116 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 TRAV21A0A0B4J279 112 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 MDKP21741 143 aaPredicted RBP15.05■□□□□ -0
COL27A1-201ENST00000356083 SIGLEC7Q9Y286 467 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 ARAP2Q8WZ64 1704 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 GREB1Q4ZG55 1949 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 LRP6O75581 1613 aa15.05■□□□□ -0
COL27A1-201ENST00000356083 SMIM4Q8WVI0 70 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 MBD3L1Q8WWY6 194 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 TRGV2A0A075B6R0 118 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 GDF9O60383 454 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 IL4P05112 153 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 HIST1H1AQ02539 215 aaPredicted RBP15.04■□□□□ -0
COL27A1-201ENST00000356083 FABP2P12104 132 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 WDFY1Q8IWB7 410 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 ACVR1Q04771 509 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 RCC2Q9P258 522 aaKnown RBP15.04■□□□□ -0
COL27A1-201ENST00000356083 AMY1AP04745 511 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 CD1AP06126 327 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 USF3Q68DE3 2245 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.04■□□□□ -0
COL27A1-201ENST00000356083 SLC25A20O43772 301 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 CEACAM4O75871 244 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 RPL27AP46776 148 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms