RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CALHM1Q8IU99 346 aa11.02□□□□□ -0.64
SYNCRIP-201ENST00000355238 AKIRIN1Q9H9L7 192 aaPredicted RBP11.02□□□□□ -0.64
SYNCRIP-201ENST00000355238 TMSB15BA0A087X1C1 80 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 GPR35Q9HC97 309 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 GLRX2Q9NS18 164 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 LIPFP07098 398 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 LINC00869P0C866 280 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 JOSD1Q15040 202 aaPredicted RBP11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 ZNF788Q6ZQV5 615 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 ATOH7Q8N100 152 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 FAM222BQ8WU58 562 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 OR4A8P0C604 315 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 LRRC75BQ2VPJ9 315 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 SOSTQ9BQB4 213 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 MAP1LC3AQ9H492 121 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 ADIPOQQ15848 244 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 RHBDD2Q6NTF9 364 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 ZNF645Q8N7E2 425 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 FAM206AQ9NX38 181 aa11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 MBD1Q9UIS9 605 aaPredicted RBP11.02□□□□□ -0.65
SYNCRIP-201ENST00000355238 HRKO00198 91 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 OTX1P32242 354 aaPredicted RBP11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 EMP1P54849 157 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 LMX1BO60663 402 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 DRD3P35462 400 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 COL10A1Q03692 680 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 CYP2G1PQ6ZSU1 146 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 TRAV9-1A0A075B6T8 112 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 A0A1W2PP11 408 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 EPHA8P29322 1005 aaPredicted RBP11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 RBPMS2Q6ZRY4 209 aaKnown RBP11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 RASL10BQ96S79 203 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 ARL14EPLP0DKL9 152 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 FGF5P12034 268 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 LGALS7P47929 136 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 ARF6P62330 175 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 KIAA1644Q3SXP7 199 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 C19orf24Q9BVV8 132 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 SCNM1Q9BWG6 230 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 S1PR2O95136 353 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 IL4P05112 153 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 NGFRP08138 427 aa11.01□□□□□ -0.65
SYNCRIP-201ENST00000355238 PCM1Q15154 2024 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
SYNCRIP-201ENST00000355238 MT-CO3P00414 261 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 CSRP3P50461 194 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 FUT5Q11128 374 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 FAM27BQ5VT28 67 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 SAMD13Q5VXD3 122 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 VCX2Q9H322 139 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 MIC13Q5XKP0 118 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 AMELYQ99218 206 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 TRAV39A0A0B4J263 110 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 LYZL6O75951 148 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 IFI6P09912 130 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 RPS20P60866 119 aaKnown RBP11□□□□□ -0.65
SYNCRIP-201ENST00000355238 TNFRSF9Q07011 255 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 FXYD3Q14802 87 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 CEACAM21Q3KPI0 293 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 PTCRAQ6ISU1 281 aaPredicted RBP11□□□□□ -0.65
SYNCRIP-201ENST00000355238 OR8B2Q96RD0 313 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 HSPB7Q9UBY9 170 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 ECM29Q5VYK3 1845 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 TRAV17A0A0B4J275 112 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 CEACAM18A8MTB9 384 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 SCTP09683 121 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 SRFP11831 508 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 CBLN1P23435 193 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 PSMG4Q5JS54 123 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 FGFRL1Q8N441 504 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 CADM4Q8NFZ8 388 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 IGLV1-36A0A0B4J1U3 117 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 RNF222A6NCQ9 220 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 COX7A1P24310 79 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 SFXN3Q9BWM7 321 aa11□□□□□ -0.65
SYNCRIP-201ENST00000355238 TBL2Q9Y4P3 447 aaKnown RBP11□□□□□ -0.65
SYNCRIP-201ENST00000355238 IGKV1D-16P01601 117 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 SMAD4Q13485 552 aaKnown RBP10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 LAMTOR2Q9Y2Q5 125 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 SMCHD1A6NHR9 2005 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TMEM14DPA8MWL7 114 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 C8orf88P0DMB2 117 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 NUBP1P53384 320 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TMEM177Q53S58 311 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 LILRA6Q6PI73 481 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 CCL17Q92583 94 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TINAGQ9UJW2 476 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 F11RQ9Y624 299 aaKnown RBP10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TAF1P21675 1872 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 SLC25A17O43808 307 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TNFSF10P50591 281 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 SSPNQ14714 243 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TMEM108Q6UXF1 575 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 PHF7Q9BWX1 381 aaPredicted RBP10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 IL36BQ9NZH7 164 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 SCN1AP35498 2009 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 ALS2Q96Q42 1657 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms