RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 COX6A1P12074 109 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 DUSP1P28562 367 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 DSCR4P56555 118 aaPredicted RBP8.02□□□□□ -1.12
SMG6-202ENST00000354901 SRYQ05066 204 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 CEACAM16Q2WEN9 425 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 CXorf66Q5JRM2 361 aaPredicted RBP8.02□□□□□ -1.12
SMG6-202ENST00000354901 WIPI1Q5MNZ9 446 aaPredicted RBP8.02□□□□□ -1.12
SMG6-202ENST00000354901 Q6ZWC4 215 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 BCL2L2Q92843 193 aaPredicted RBP8.02□□□□□ -1.12
SMG6-202ENST00000354901 ACY3Q96HD9 319 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 LOXL4Q96JB6 756 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 Q96M66 194 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 MAP1LC3BQ9GZQ8 125 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 CLEC5AQ9NY25 188 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 LOC105371242A0A075B767 164 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 B4DEV8 164 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 OR7C1O76099 320 aaPredicted RBP8.02□□□□□ -1.13
SMG6-202ENST00000354901 HBE1P02100 147 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 CCL2P13500 99 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 ACOT6Q3I5F7 207 aaPredicted RBP8.02□□□□□ -1.13
SMG6-202ENST00000354901 AAED1Q7RTV5 226 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 ZNF738Q8NE65 137 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 NAT6Q93015 286 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 STARD4Q96DR4 205 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 ZNF442Q9H7R0 627 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 ZDHHC11Q9H8X9 412 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 GPR35Q9HC97 309 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 RYDENQ9NUL5 291 aaKnown RBP8.02□□□□□ -1.13
SMG6-202ENST00000354901 CEACAM18A8MTB9 384 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 C3orf80F5H4A9 247 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 KLF7O75840 302 aaPredicted RBP8.02□□□□□ -1.13
SMG6-202ENST00000354901 GNRHRP30968 328 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 RND2P52198 227 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 UBE2V1Q13404 147 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 TMEM241Q24JQ0 296 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 PLCXD3Q63HM9 321 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 OR4F5Q8NH21 305 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 TMEM54Q969K7 222 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 IMMP1LQ96LU5 166 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 OR4F4Q96R69 305 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 Q9N2K0 584 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 TMEM106BQ9NUM4 274 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 ST3GAL6Q9Y274 331 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 LAMTOR2Q9Y2Q5 125 aa8.02□□□□□ -1.13
SMG6-202ENST00000354901 IGKV1-12A0A0C4DH73 117 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 FOXI3A8MTJ6 420 aaPredicted RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 LILRA1O75019 489 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 NRASP01111 189 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 IGKV1D-12P01611 117 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 CYC1P08574 325 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 PSG1P11464 419 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 PNRC1Q12796 327 aaPredicted RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 C10orf128Q5T292 105 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 OR8G2PQ6IF36 304 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 SLC23A3Q6PIS1 610 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 AGBL5Q8NDL9 886 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 OR1F12Q8NHA8 337 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 SNIP1Q8TAD8 396 aaKnown RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 ABHD3Q8WU67 409 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 RBMXL1Q96E39 390 aaKnown RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 ANGPTL4Q9BY76 406 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 UBE2J1Q9Y385 318 aaPredicted RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 RP1L1Q8IWN7 2480 aaPredicted RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 DOCK10Q96BY6 2186 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 ODAMA1E959 279 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 CDS2O95674 445 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 IFNA5P01569 189 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 NTF3P20783 257 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 RPS16P62249 146 aaKnown RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 FFAR4Q5NUL3 377 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 ST6GALNAC6Q969X2 333 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 BOD1Q96IK1 185 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 RPRMQ9NS64 109 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 A0A096LPE4 126 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 A0A1W2PPZ6 126 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 CBR3O75828 277 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 P04436 131 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 CTSSP25774 331 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 TPPP2P59282 170 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 ZFP36L1Q07352 338 aaKnown RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 IZUMO4Q1ZYL8 232 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 FAM27BQ5VT28 67 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 TMEM252Q8N6L7 170 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 SCGB1C1Q8TD33 95 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 TNFRSF14Q92956 283 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 TM2D1Q9BX74 207 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 SEPSECSQ9HD40 501 aaKnown RBP8.01□□□□□ -1.13
SMG6-202ENST00000354901 TUBD1Q9UJT1 453 aa8.01□□□□□ -1.13
SMG6-202ENST00000354901 DIRC3C9JPN6 131 aa8□□□□□ -1.13
SMG6-202ENST00000354901 SH2D1BO14796 132 aa8□□□□□ -1.13
SMG6-202ENST00000354901 HRASP01112 189 aa8□□□□□ -1.13
SMG6-202ENST00000354901 IGLV3-1P01715 115 aa8□□□□□ -1.13
SMG6-202ENST00000354901 PFN1P07737 140 aaKnown RBP8□□□□□ -1.13
SMG6-202ENST00000354901 OTX1P32242 354 aaPredicted RBP8□□□□□ -1.13
SMG6-202ENST00000354901 FOLR3P41439 243 aa8□□□□□ -1.13
SMG6-202ENST00000354901 SOX8P57073 446 aa8□□□□□ -1.13
SMG6-202ENST00000354901 PSG4Q00888 419 aa8□□□□□ -1.13
SMG6-202ENST00000354901 OR4A47Q6IF82 309 aa8□□□□□ -1.13
SMG6-202ENST00000354901 PRR27Q6MZM9 219 aa8□□□□□ -1.13
SMG6-202ENST00000354901 OR51G1Q8NGK1 321 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms