RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 FAM213BQ8TBF2 198 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 ISOC2Q96AB3 205 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 IFT22Q9H7X7 185 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 TUBA4BQ9H853 241 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 HCFC1P51610 2035 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 A0A1W2PPH5 198 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 E7EQL1 145 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 K7N7A8 449 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 POLR2GP62487 172 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBA3-201ENST00000349511 CCL8P80075 99 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 TFF3Q07654 80 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 FAM201AQ5SY85 155 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 LRRC29Q8WV35 223 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 MEGF10Q96KG7 1140 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 PBDC1Q9BVG4 233 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 TMEM222Q9H0R3 208 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 UBE2J1Q9Y385 318 aaPredicted RBP11.24□□□□□ -0.61
UBA3-201ENST00000349511 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 IGSF23A1L1A6 192 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 CDS2O95674 445 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 OR2H2O95918 312 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 IGHV1-46P01743 117 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 ACAA1P09110 424 aaPredicted RBP11.23□□□□□ -0.61
UBA3-201ENST00000349511 NKX2-1P43699 371 aaPredicted RBP11.23□□□□□ -0.61
UBA3-201ENST00000349511 SRPXP78539 464 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 MPV17LQ2QL34 196 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 SPIN3Q5JUX0 258 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 SELENOHQ8IZQ5 122 aaKnown RBP11.23□□□□□ -0.61
UBA3-201ENST00000349511 FAM185AQ8N0U4 392 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 ZNF561Q8N587 486 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 TMEM56Q96MV1 263 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 TMEM56-RWDD3S4R434 201 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 TRAV39A0A0B4J263 110 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 A0A1B0GWJ7 208 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 PTBP3O95758 552 aaKnown RBP11.23□□□□□ -0.61
UBA3-201ENST00000349511 CD3EP07766 207 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 OR13C7P0DN81 318 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 EGR1P18146 543 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 AGAP20933 346 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 TNFAIP6P98066 277 aaPredicted RBP11.23□□□□□ -0.61
UBA3-201ENST00000349511 CLINT1Q14677 625 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 C4orf17Q53FE4 359 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 Q6P435 159 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 C20orf204Q6ZNR8 217 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 Q9N2K0 584 aa11.23□□□□□ -0.61
UBA3-201ENST00000349511 MYO18BQ8IUG5 2567 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 ZNF462Q96JM2 2506 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 IGHV3OR15-7A0A075B7D8 119 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 A0A1W2PPE3 182 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A10PA6NDY2 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A18PA6NE21 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A16PA6NEW6 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A20PA6NIJ5 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A8PA6NJQ4 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A7PA6NKC0 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A22PA8MWA6 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A12PA8MX19 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A5PA8MXJ8 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A23PA8MXZ1 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 SCTP09683 121 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A15PP0C7V4 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A13PP0C7W8 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A14PP0C7W9 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 FAM90A24PP0C7X0 464 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 ATP6V0CP27449 155 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 CD200P41217 278 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 B2MP61769 119 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 ACP7Q6ZNF0 438 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 ZNF818PQ6ZRF7 136 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 Q8IYB0 196 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 LFNGQ8NES3 379 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 OR2G3Q8NGZ4 309 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 GPHA2Q96T91 129 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 ABHD14AQ9BUJ0 271 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 PLEKHF2Q9H8W4 249 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
UBA3-201ENST00000349511 A0A1B0GW64 132 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 SLC33A1O00400 549 aaPredicted RBP11.21□□□□□ -0.61
UBA3-201ENST00000349511 ADAM20O43506 726 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 SSSCA1O60232 199 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 PITX3O75364 302 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 HAND1O96004 215 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 ARG1P05089 322 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 S100A6P06703 90 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 OMGP23515 440 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 SULT1A1P50225 295 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 RND3P61587 244 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 ZNF266Q14584 549 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.61
UBA3-201ENST00000349511 Q6ZS49 121 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 SSX8Q7RTT4 187 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 ITLN2Q8WWU7 325 aaPredicted RBP11.21□□□□□ -0.61
UBA3-201ENST00000349511 POM121Q96HA1 1249 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 RARRES2Q99969 163 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms