RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 H0Y8G0 127 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 NDUFB3O43676 98 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 COX7A2P2O60397 106 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 CD5P06127 495 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 FAM214BQ7L5A3 538 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 C18orf12Q96KH6 178 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 LYZL4Q96KX0 146 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 RHOVQ96L33 236 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 CHRDL1Q9BU40 450 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 SPRY3O43610 288 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 TRGC1P0CF51 173 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 SRP14P37108 136 aaKnown RBP12.65□□□□□ -0.38
NUP50-201ENST00000347635 RAB1BQ9H0U4 201 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 SH2D2AQ9NP31 389 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 RAB7AP51149 207 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 RIPPLY2Q5TAB7 128 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 SLC24A4Q8NFF2 622 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 TAF15Q92804 592 aaKnown RBP eCLIP12.65□□□□□ -0.38
NUP50-201ENST00000347635 ZNF319Q9P2F9 582 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 TCAPO15273 167 aa12.65□□□□□ -0.39
NUP50-201ENST00000347635 ZNHIT1O43257 154 aa12.65□□□□□ -0.39
NUP50-201ENST00000347635 SYNGR3O43761 229 aa12.65□□□□□ -0.39
NUP50-201ENST00000347635 FOLR2P14207 255 aa12.65□□□□□ -0.39
NUP50-201ENST00000347635 CRISP2P16562 243 aa12.65□□□□□ -0.39
NUP50-201ENST00000347635 OR1P1Q8NH06 330 aa12.65□□□□□ -0.39
NUP50-201ENST00000347635 GP6Q9HCN6 339 aa12.65□□□□□ -0.39
NUP50-201ENST00000347635 SUPT4H1P63272 117 aaKnown RBP12.64□□□□□ -0.39
NUP50-201ENST00000347635 PRR27Q6MZM9 219 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 LINC00587B1AMM8 73 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 SPINK4O60575 86 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
NUP50-201ENST00000347635 OR10J1P30954 320 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 OR10X1Q8NGY0 326 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 HSD17B10Q99714 261 aaKnown RBP12.64□□□□□ -0.39
NUP50-201ENST00000347635 LOC102723996A0A087X1L8 192 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 UBE2CO00762 179 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 ACAA1P09110 424 aaPredicted RBP12.64□□□□□ -0.39
NUP50-201ENST00000347635 WDR73Q6P4I2 378 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 LHFPL1Q86WI0 220 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 NFAM1Q8NET5 270 aaPredicted RBP12.64□□□□□ -0.39
NUP50-201ENST00000347635 RBKSQ9H477 322 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 COLCA2A8K830 154 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 DLL1O00548 723 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 DDTP30046 118 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 FAM162BQ5T6X4 162 aa12.64□□□□□ -0.39
NUP50-201ENST00000347635 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
NUP50-201ENST00000347635 TNFAIP6P98066 277 aaPredicted RBP12.63□□□□□ -0.39
NUP50-201ENST00000347635 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 IL36GQ9NZH8 169 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 TMEM210A6NLX4 147 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 CD59P13987 128 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
NUP50-201ENST00000347635 FADS6Q8N9I5 356 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 LSM10Q969L4 123 aaKnown RBP12.63□□□□□ -0.39
NUP50-201ENST00000347635 TINAGQ9UJW2 476 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 COL4A6Q14031 1691 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 A0A087WWC5 75 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 DBX1A6NMT0 343 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 MDP1Q86V88 176 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 OR4C12Q96R67 309 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 TCF20Q9UGU0 1960 aaKnown RBP12.63□□□□□ -0.39
NUP50-201ENST00000347635 QRFPP83859 136 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 CFHR1Q03591 330 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 IMMP1LQ96LU5 166 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 PCGF1Q9BSM1 259 aa12.63□□□□□ -0.39
NUP50-201ENST00000347635 AURKAIP1Q9NWT8 199 aaPredicted RBP12.63□□□□□ -0.39
NUP50-201ENST00000347635 PLXNB3Q9ULL4 1909 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 ZDBF2Q9HCK1 2354 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 CHEK1O14757 476 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 OR2H2O95918 312 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 CXorf1O96002 111 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 DLL3Q9NYJ7 618 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 K7EQM0 130 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 HSBP1O75506 76 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 GCGP01275 180 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 OR1L6Q8NGR2 347 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 OR4S2Q8NH73 311 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 TPPP3Q9BW30 176 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 CBY1Q9Y3M2 126 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 COL4A4P53420 1690 aaPredicted RBP12.62□□□□□ -0.39
NUP50-201ENST00000347635 CCL21O00585 134 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 SRSF10O75494 262 aaKnown RBP12.62□□□□□ -0.39
NUP50-201ENST00000347635 AESQ08117 197 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 LYG1Q8N1E2 194 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 ZNF645Q8N7E2 425 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 OR1A1Q9P1Q5 309 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 IGKV1D-8A0A087WSZ0 117 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 FAM90A26D6RGX4 464 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 ADCYAP1P18509 176 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 WDR25Q64LD2 544 aaPredicted RBP12.62□□□□□ -0.39
NUP50-201ENST00000347635 SLC25A40Q8TBP6 338 aa12.62□□□□□ -0.39
NUP50-201ENST00000347635 PSMG3Q9BT73 122 aaPredicted RBP12.62□□□□□ -0.39
NUP50-201ENST00000347635 MRPS18CQ9Y3D5 142 aaKnown RBP12.62□□□□□ -0.39
NUP50-201ENST00000347635 FAM157CP0CG43 387 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 GNG10P50151 68 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 SSMEM1Q8WWF3 244 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms