RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RPL30P62888 115 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 EIF4EBP1Q13541 118 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CR1LQ2VPA4 569 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZNF561Q8N587 486 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DEFB108BQ8NET1 73 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 AGMATQ9BSE5 352 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 C17orf100A8MU93 164 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 KIAA1324LA8MWY0 1029 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ST8SIA5O15466 376 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 RAMP3O60896 148 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ASCL1P50553 236 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 STUMQ69YW2 141 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 UQCC3Q6UW78 93 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 BTNL3Q6UXE8 466 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TMEM252Q8N6L7 170 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MARC2Q969Z3 335 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 NGBQ9NPG2 151 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DCAF16Q9NXF7 216 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PSG11Q9UQ72 335 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 IRF2P14316 349 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MMP9P14780 707 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TNFRSF1AP19438 455 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 OMGP23515 440 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 LPAR6P43657 344 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MSMO1Q15800 293 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 OR2B11Q5JQS5 317 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DUX4L9Q6RFH8 374 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 STPG2Q8N412 459 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SAT2Q96F10 170 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DIRC2Q96SL1 478 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PLA2G2EQ9NZK7 142 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 GNG12Q9UBI6 72 aa11.74□□□□□ -0.53
CDK5RAP1-202ENST00000346416 RAB19A4D1S5 217 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CA7P43166 264 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SULT1A2P50226 295 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CATR1Q13166 79 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 C14orf79Q96F83 325 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SMIM8Q96KF7 97 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 OR6C3Q9NZP0 311 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DSCAML1Q8TD84 2053 aa11.73□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MED6O75586 246 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CLDN1O95832 211 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 GYPAP02724 150 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CD55P08174 381 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PAX9P55771 341 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 BRWD1-AS2P59051 145 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TAGLNQ01995 201 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TLE1Q04724 770 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CLINT1Q14677 625 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MST1LQ2TV78 715 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MORN2Q502X0 79 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PXDC1Q5TGL8 231 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ODF3L1Q8IXM7 274 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TCTEX1D2Q8WW35 142 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 EDARADDQ8WWZ3 215 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CCL13Q99616 98 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 GINS3Q9BRX5 216 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 COQ3Q9NZJ6 369 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 JPT1Q9UK76 154 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 RAI1Q7Z5J4 1906 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PIEZO1Q92508 2521 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 VSTM5A8MXK1 200 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 NUDT19A8MXV4 375 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CST7O76096 145 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MUC1P15941 1255 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 LOXL3P58215 753 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZNF816Q0VGE8 651 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 Q3ZCU0 254 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SPAG16Q8N0X2 631 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ST6GALNAC3Q8NDV1 305 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CALYQ9NYX4 217 aa11.72□□□□□ -0.53
CDK5RAP1-202ENST00000346416 C17orf98A8MV24 154 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 F2RL2O00254 374 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 YPEL1O60688 119 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 KRASP01116 189 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SEC11BP0C7V7 166 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CGB3P0DN86 165 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CGB7P0DN87 165 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SPP1P10451 314 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 LINC00205P59089 165 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 NCMAPQ5T1S8 102 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TEX36Q5VZQ5 186 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZNF788Q6ZQV5 615 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DMRTC2Q8IXT2 367 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 FAM216BQ8N7L0 139 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 KDF1Q8NAX2 398 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 HSD17B11Q8NBQ5 300 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 YPEL2Q96QA6 119 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms