RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PPA2Q9H2U2 334 aa13.02□□□□□ -0.32
RAB5C-201ENST00000346213 SEBOXQ9HB31 216 aaPredicted RBP13.02□□□□□ -0.32
RAB5C-201ENST00000346213 ZNF230Q9UIE0 474 aaPredicted RBP13.02□□□□□ -0.32
RAB5C-201ENST00000346213 VSIG4Q9Y279 399 aa13.02□□□□□ -0.32
RAB5C-201ENST00000346213 ODF3BA8MYP8 253 aa13.02□□□□□ -0.33
RAB5C-201ENST00000346213 SLC33A1O00400 549 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-201ENST00000346213 OR4E1P0C645 316 aa13.02□□□□□ -0.33
RAB5C-201ENST00000346213 GLIPR1P48060 266 aa13.02□□□□□ -0.33
RAB5C-201ENST00000346213 MRPS15P82914 257 aaKnown RBP13.02□□□□□ -0.33
RAB5C-201ENST00000346213 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.33
RAB5C-201ENST00000346213 SLC25A42Q86VD7 318 aa13.02□□□□□ -0.33
RAB5C-201ENST00000346213 TMEM17Q86X19 198 aa13.02□□□□□ -0.33
RAB5C-201ENST00000346213 OR52B4Q8NGK2 314 aa13.02□□□□□ -0.33
RAB5C-201ENST00000346213 ZNF431Q8TF32 576 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-201ENST00000346213 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-201ENST00000346213 ZNF436Q9C0F3 470 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-201ENST00000346213 HAX1O00165 279 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 FABP7O15540 132 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 OR7C1O76099 320 aaPredicted RBP13.01□□□□□ -0.33
RAB5C-201ENST00000346213 ZNF728P0DKX0 622 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 IL13RA2Q14627 380 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 C4orf46Q504U0 113 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 OVCH2Q7RTZ1 564 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 LHFPL1Q86WI0 220 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 Q8IYB0 196 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 TMEM86BQ8N661 226 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 PPP1R35Q8TAP8 253 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 CAPSLQ8WWF8 208 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 RCC2Q9P258 522 aaKnown RBP13.01□□□□□ -0.33
RAB5C-201ENST00000346213 POMT1Q9Y6A1 747 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 MEGF8Q7Z7M0 2845 aa13.01□□□□□ -0.33
RAB5C-201ENST00000346213 TRAV24A0A0B4J272 114 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 HSPB6O14558 160 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 FCGR3AP08637 254 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 IGHV1-8P0DP01 117 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 LMO1P25800 156 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 P2RX3P56373 397 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 TSPAN5P62079 268 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 AESQ08117 197 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 ATXN7L3Q14CW9 347 aaPredicted RBP13□□□□□ -0.33
RAB5C-201ENST00000346213 CDK10Q15131 360 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 SPIN3Q5JUX0 258 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 NCR3LG1Q68D85 454 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 TMED4Q7Z7H5 227 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 C3orf56Q8N813 242 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 OR5D13Q8NGL4 314 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 PLPPR1Q8TBJ4 325 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 MAFIPQ8WZ33 124 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 ZNF747Q9BV97 191 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 MGAT4CQ9UBM8 478 aa13□□□□□ -0.33
RAB5C-201ENST00000346213 IGKV1D-8A0A087WSZ0 117 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 CHST1O43916 411 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 FBP1P09467 338 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 PRAMEF5Q5TYX0 476 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 Q6ZSV7 163 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 BEND2Q8NDZ0 799 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 HYLS1Q96M11 299 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 SCGB3A2Q96PL1 93 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 RANBP3Q9H6Z4 567 aaPredicted RBP12.99□□□□□ -0.33
RAB5C-201ENST00000346213 EHFQ9NZC4 300 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 ANXA10Q9UJ72 324 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 GPR132Q9UNW8 380 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 H3BUX3 64 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 GLAP06280 429 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 UBE2MP61081 183 aaKnown RBP12.99□□□□□ -0.33
RAB5C-201ENST00000346213 FOXL1Q12952 345 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 BRICD5Q6PL45 260 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 OR2AK2Q8NG84 335 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 MARCH1Q8TCQ1 289 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 IFT22Q9H7X7 185 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 SPACA1Q9HBV2 294 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 C12orf4Q9NQ89 552 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 VPREB3Q9UKI3 123 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 LINC00312Q9Y6C7 94 aa12.99□□□□□ -0.33
RAB5C-201ENST00000346213 TRAV39A0A0B4J263 110 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 SMLR1H3BR10 107 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-201ENST00000346213 MGST3O14880 152 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 OR2A4O95047 310 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 GIPP09681 153 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-201ENST00000346213 ZBTB25P24278 435 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 RAB13P51153 203 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 TAS2R31P59538 309 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 LY6EQ16553 131 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 SRSF7Q16629 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAB5C-201ENST00000346213 C17orf58Q2M2W7 97 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 MIDNQ504T8 468 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 FAM53AQ6NSI3 398 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-201ENST00000346213 Q6ZS49 121 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 C12orf45Q8N5I9 185 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-201ENST00000346213 LINC01006Q8NI28 216 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 WFDC12Q8WWY7 111 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 DYRK2Q92630 601 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 OR2A7Q96R45 310 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 ZNF286AQ9HBT8 521 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 SIGLEC9Q9Y336 463 aa12.98□□□□□ -0.33
RAB5C-201ENST00000346213 FAM96BQ9Y3D0 163 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms