RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FCGR3BO75015 233 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 FREM3P0C091 2139 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CCL2P13500 99 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 SPINK9Q5DT21 86 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 SPATA46Q5T0L3 261 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 WDFY1Q8IWB7 410 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 PAQR4Q8N4S7 273 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 AAMDCQ9H7C9 122 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 H3BMH7 237 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF205O95201 554 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 RPS16P62249 146 aaKnown RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 SSPNQ14714 243 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LRRC75BQ2VPJ9 315 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF658BQ4V348 819 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 STXBP6Q8NFX7 210 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM170AQ8WVE7 144 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 C18orf12Q96KH6 178 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 AICDAQ9GZX7 198 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 PSG11Q9UQ72 335 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 RAMP1O60894 148 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LEPROTL1O95214 131 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 IGKV3-11P04433 115 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 NUTF2P61970 127 aaKnown RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 SNAI3Q3KNW1 292 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 Q56UQ5 140 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 GPR146Q96CH1 333 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 C14orf144Q96I85 54 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 WDR54Q9H977 334 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 WASHC3Q9Y3C0 194 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 TICRRQ7Z2Z1 1910 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 COL10A1Q03692 680 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 C11orf42Q8N5U0 333 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 OBSL1O75147 1896 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 IGSF23A1L1A6 192 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CNIH1O95406 144 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 AMY1AP04745 511 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 ADCYAP1P18509 176 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM54Q969K7 222 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM230Q96A57 120 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 A0A1W2PQF6 199 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CEACAM1P13688 526 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 HINT1P49773 126 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 PPOXP50336 477 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 OR8I2Q8N0Y5 310 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LRRC75AQ8NAA5 344 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 MIEN1Q9BRT3 115 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CXXC4Q9H2H0 198 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CIDEAO60543 219 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CRYAAP02489 173 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 COL9A1P20849 921 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 H1FXQ92522 213 aaKnown RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 MPDZO75970 2070 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 UBE2L3P68036 154 aaKnown RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 C10orf128Q5T292 105 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 SCCPDHQ8NBX0 429 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 PARD6GQ9BYG4 376 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 CLN8Q9UBY8 286 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 KIAA1671Q9BY89 1806 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 GAGE10A6NGK3 116 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 UCP1P25874 307 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LBX1P52954 281 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 WIPI1Q5MNZ9 446 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LINC00696Q6ZRV3 163 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LHFPL1Q86WI0 220 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 HIST3H2BBQ8N257 126 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 FAM89BQ8N5H3 189 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF835Q9Y2P0 537 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 TCF20Q9UGU0 1960 aaKnown RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 ARL16Q0P5N6 197 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 C16orf47Q6ZP98 133 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 MTURNQ8N3F0 131 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 C2orf88Q9BSF0 95 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 COL25A1Q9BXS0 654 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 SMOC1Q9H4F8 434 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 BARX1Q9HBU1 254 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-203ENST00000343508 HES4Q9HCC6 221 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LRRK1Q38SD2 2015 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 A6NCN8 305 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 NPIPB7O75200 414 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 PYY3Q5JQD4 70 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 VWA1Q6PCB0 445 aa4.13□□□□□ -1.75
CSMD3-203ENST00000343508 LINC00614P0C842 121 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 NPY1RP25929 384 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 VSTM2AQ8TAG5 236 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 SPSB4Q96A44 273 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 PMCHL2Q9BQD1 86 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 PRDM14Q9GZV8 571 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 GNB1P62873 340 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 PSG4Q00888 419 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 TRIM61Q5EBN2 209 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR10J3Q5JRS4 329 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 RIPPLY2Q5TAB7 128 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR2Z1Q8NG97 314 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 GNB1LQ9BYB4 327 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 IL36GQ9NZH8 169 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 IL36RNQ9UBH0 155 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR4A8P0C604 315 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 ARL14EPLP0DKL9 152 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms