RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CST9LP1Q5W188 147 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 SMIM15Q7Z3B0 74 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 MYPOPQ86VE0 399 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-201ENST00000340611 LHFPL1Q86WI0 220 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 PGAM5Q96HS1 289 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 LYZL4Q96KX0 146 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 ZNF701Q9NV72 531 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-201ENST00000340611 WSB1Q9Y6I7 421 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 CFAP46Q8IYW2 2715 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 A0A087WWC5 75 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 CEACAM18A8MTB9 384 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 TMEM238C9JI98 176 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 ERVS71-1P61550 626 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 GNB2P62879 340 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 MMDQ15546 238 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 OR51T1Q8NGJ9 327 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 KCNG3Q8TAE7 436 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 SCGB3A2Q96PL1 93 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 LAMP3Q9UQV4 416 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 USP24Q9UPU5 2620 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 IGKV1D-8A0A087WSZ0 117 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 SS18L1O75177 396 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-201ENST00000340611 FCGR2AP12318 317 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 ERASQ7Z444 233 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 GBGT1Q8N5D6 347 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 OR1F12Q8NHA8 337 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 LINC00470Q9BZP3 86 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 DEDDO75618 318 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 CELA3BP08861 270 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 SP6Q3SY56 376 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 ZNF324BQ6AW86 544 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-201ENST00000340611 C1QL2Q7Z5L3 287 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 C14orf166Q9Y224 244 aaKnown RBP12.84□□□□□ -0.35
BRAT1-201ENST00000340611 KIR2DL5BA0A0G2JN68 375 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 KIR2DL5BA0A0G2JPC4 375 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 TMEM238LA0A1B0GVL6 79 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 TNFSF13O75888 250 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 UCP2P55851 309 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 ATP6V1FQ16864 119 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 CHRFAM7AQ494W8 412 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 KIR2DL5AQ8N109 375 aa12.84□□□□□ -0.35
BRAT1-201ENST00000340611 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 CLDN34H7C241 214 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 TNFSF12O43508 249 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 SMPD2O60906 423 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 AGFG2O95081 481 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 BLVRBP30043 206 aaPredicted RBP12.83□□□□□ -0.36
BRAT1-201ENST00000340611 GFRALQ6UXV0 394 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 C1orf123Q9NWV4 160 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 EPG5Q9HCE0 2579 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 BORCS7-ASMTA0A0B4J1R7 106 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 C5orf49A4QMS7 147 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 FIGNL2A6NMB9 653 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 AHRRA9YTQ3 701 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 CRYGSP22914 178 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 SELENOTP62341 195 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 RAB11AP62491 216 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 GRB2P62993 217 aaKnown RBP12.83□□□□□ -0.36
BRAT1-201ENST00000340611 HLA-DRB3P79483 266 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 EMG1Q92979 244 aaKnown RBP12.83□□□□□ -0.36
BRAT1-201ENST00000340611 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.36
BRAT1-201ENST00000340611 OR10A2Q9H208 303 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 ELL3Q9HB65 397 aaPredicted RBP12.83□□□□□ -0.36
BRAT1-201ENST00000340611 FUT9Q9Y231 359 aa12.83□□□□□ -0.36
BRAT1-201ENST00000340611 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
BRAT1-201ENST00000340611 UCNP55089 124 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 TLE1Q04724 770 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 OR1K1Q8NGR3 316 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 STARD4Q96DR4 205 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 ZNF2Q9BSG1 426 aaPredicted RBP12.82□□□□□ -0.36
BRAT1-201ENST00000340611 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 FBLN5Q9UBX5 448 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 FAHP16930 419 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 PLA2G5P39877 138 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 GUSBP1Q15486 140 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 MPV17LQ2QL34 196 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 STPG4Q8N801 248 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 NUDT11Q96G61 164 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 SLC35E1Q96K37 410 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 VAX2Q9UIW0 290 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 SHANK1Q9Y566 2161 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 OR6C6A6NF89 314 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 NGFP01138 241 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 SEC11BP0C7V7 166 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 MDP1Q86V88 176 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 DOLPP1Q86YN1 238 aa12.82□□□□□ -0.36
BRAT1-201ENST00000340611 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
BRAT1-201ENST00000340611 IFNA21P01568 189 aa12.81□□□□□ -0.36
BRAT1-201ENST00000340611 BMP5P22003 454 aa12.81□□□□□ -0.36
BRAT1-201ENST00000340611 TOMM40LQ969M1 308 aa12.81□□□□□ -0.36
BRAT1-201ENST00000340611 SPTSSAQ969W0 71 aa12.81□□□□□ -0.36
BRAT1-201ENST00000340611 NUDT16L1Q9BRJ7 211 aaKnown RBP12.81□□□□□ -0.36
BRAT1-201ENST00000340611 MIEN1Q9BRT3 115 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms