RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 CCL2P13500 99 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 LRRC75BQ2VPJ9 315 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 RHBDD2Q6NTF9 364 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 TOMM20LQ6UXN7 152 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 Q6ZSR3 168 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 GBGT1Q8N5D6 347 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 ZIC4Q8N9L1 334 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 FGFBP3Q8TAT2 258 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 TAF15Q92804 592 aaKnown RBP eCLIP10.07□□□□□ -0.85e-6■□□□□ 8.5
RBM39-202ENST00000338163 WDR61Q9GZS3 305 aaKnown RBP10.07□□□□□ -0.8
RBM39-202ENST00000338163 OR6C3Q9NZP0 311 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 COL5A1P20908 1838 aaPredicted RBP10.07□□□□□ -0.8
RBM39-202ENST00000338163 IGLV3-32A0A0A0MS00 114 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 C1QTNF9BB2RNN3 333 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 SCRG1O75711 98 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 OR3A1P47881 315 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 SLC38A11Q08AI6 406 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 TMEM42Q69YG0 159 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 KCNIP4Q6PIL6 250 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 PINX1Q96BK5 328 aaKnown RBP10.07□□□□□ -0.8
RBM39-202ENST00000338163 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
RBM39-202ENST00000338163 IL36GQ9NZH8 169 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 TRAPPC1Q9Y5R8 145 aa10.07□□□□□ -0.8
RBM39-202ENST00000338163 EML6Q6ZMW3 1958 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 NBEAQ8NFP9 2946 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 GRIFINA4D1Z8 144 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 TP53I11O14683 189 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 PAGE4O60829 102 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 WDR1O75083 606 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 VAMP5O95183 116 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 SFTPCP11686 197 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 C9orf135Q5VTT2 229 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 WDR74Q6RFH5 385 aaPredicted RBP10.06□□□□□ -0.8
RBM39-202ENST00000338163 OR56B2PQ8NGI1 322 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 ZNF488Q96MN9 340 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 SRXN1Q9BYN0 137 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 CHCHD2Q9Y6H1 151 aaPredicted RBP10.06□□□□□ -0.8
RBM39-202ENST00000338163 A0A0J9YW62 118 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 MARCH11A6NNE9 402 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 CRYAAP02489 173 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
RBM39-202ENST00000338163 NTF4P34130 210 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 PDLIM4P50479 330 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 NHLH1Q02575 133 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 CEACAM16Q2WEN9 425 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 C1orf194Q5T5A4 169 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 C20orf204Q6ZNR8 217 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 TMEM38BQ9NVV0 291 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 ATP23Q9Y6H3 246 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 PCNX2A6NKB5 2137 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 EXPH5Q8NEV8 1989 aa10.06□□□□□ -0.8
RBM39-202ENST00000338163 NUPR1O60356 82 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 TUSC2O75896 110 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 NAPSAO96009 420 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 HPRT1P00492 218 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 IL3RAP26951 378 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 GCH1P30793 250 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 UBE2G2P60604 165 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 ACSM6Q6P461 480 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 AKIRIN1Q9H9L7 192 aaPredicted RBP10.05□□□□□ -0.8
RBM39-202ENST00000338163 PATZ1Q9HBE1 687 aaKnown RBP10.05□□□□□ -0.8
RBM39-202ENST00000338163 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 PGPEP1LA6NFU8 196 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 KIAA1324LA8MWY0 1029 aaPredicted RBP10.05□□□□□ -0.8
RBM39-202ENST00000338163 CCL3P10147 92 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 EDN3P14138 238 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 RAB4AP20338 218 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 HNF1AP20823 631 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 FOXL2NBQ6ZUU3 175 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 TCF23Q7RTU1 214 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 CISD2Q8N5K1 135 aaKnown RBP10.05□□□□□ -0.8
RBM39-202ENST00000338163 FADS6Q8N9I5 356 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 OR10G9Q8NGN4 311 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 OR10G7Q8NGN6 311 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 PSMF1Q92530 271 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 FOXB1Q99853 325 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 AGMATQ9BSE5 352 aa10.05□□□□□ -0.8
RBM39-202ENST00000338163 IGHV5-10-1A0A0J9YXX1 117 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 TRAPPC2LH3BP13 241 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 DLEU1O43261 78 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 ACP1P24666 158 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 OR10J1P30954 320 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 PCP4P48539 62 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 RELQ04864 619 aaPredicted RBP10.04□□□□□ -0.8
RBM39-202ENST00000338163 TDRG1Q3Y452 100 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 DEFB124Q8NES8 71 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 RNF138Q8WVD3 245 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 OR2H1Q9GZK4 316 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 WNT5BQ9H1J7 359 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 PIEZO1Q92508 2521 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 OR6C6A6NF89 314 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 TMEM250H0YL14 139 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 IRF2P14316 349 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 PPP1CBP62140 327 aa10.04□□□□□ -0.8
RBM39-202ENST00000338163 PRDX4Q13162 271 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms