RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 RNF224P0DH78 156 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 NDUFB7P17568 137 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 EIF4EBP1Q13541 118 aaPredicted RBP12.78□□□□□ -0.36
LIMS1-202ENST00000338045 TMEM30BQ3MIR4 351 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
LIMS1-202ENST00000338045 IL22RA2Q969J5 263 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 OR2D2Q9H210 308 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 TAS2R3Q9NYW6 316 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 GNG12Q9UBI6 72 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 TMED3Q9Y3Q3 217 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 KLF2Q9Y5W3 355 aaPredicted RBP12.78□□□□□ -0.36
LIMS1-202ENST00000338045 DOPEY1Q5JWR5 2465 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 FXYD6-FXYD2A0A087WZ82 144 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 DUXBA0A1W2PPF3 345 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 ITGB1BP1O14713 200 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 MPC2O95563 127 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 CXCL2P19875 107 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 PSMB6P28072 239 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 LRRC10Q5BKY1 277 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 TMEM268Q5VZI3 342 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 LAMP3Q9UQV4 416 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 DVL1O14640 695 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 OMGP23515 440 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
LIMS1-202ENST00000338045 LTC4SQ16873 150 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 IAH1Q2TAA2 248 aaPredicted RBP12.77□□□□□ -0.37
LIMS1-202ENST00000338045 LRRC37A5PQ49AS3 106 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 SELENOHQ8IZQ5 122 aaKnown RBP12.77□□□□□ -0.37
LIMS1-202ENST00000338045 OR52M1Q8NGK5 317 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 OR51H1Q8NH63 302 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 C19orf12Q9NSK7 152 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 GFOD1Q9NXC2 390 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 RNF150Q9ULK6 438 aa12.77□□□□□ -0.37
LIMS1-202ENST00000338045 ARPC5O15511 151 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 RPA2P15927 270 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF124Q15973 351 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF695Q8IW36 515 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 RBPMSQ93062 196 aaKnown RBP12.76□□□□□ -0.37
LIMS1-202ENST00000338045 SLA2Q9H6Q3 261 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 UBTD1Q9HAC8 227 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 LIN7CQ9NUP9 197 aaKnown RBP12.76□□□□□ -0.37
LIMS1-202ENST00000338045 IDI2-AS1Q9NZ38 188 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF273Q14593 569 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 OR10A7Q8NGE5 316 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 PSG11Q9UQ72 335 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 LRBAP50851 2863 aa12.76□□□□□ -0.37
LIMS1-202ENST00000338045 RNF212BA8MTL3 300 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 H0YIZ8 118 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 LY6HO94772 140 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 LYL1P12980 280 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 DAOP14920 347 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 TMEM200BQ69YZ2 307 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 THAP6Q8TBB0 222 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 ABHD14BQ96IU4 210 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 GAL3ST2Q9H3Q3 398 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 HEXA-AS1Q9H8Q6 139 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 SDHAF2Q9NX18 166 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 TNFSF18Q9UNG2 199 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF462Q96JM2 2506 aa12.75□□□□□ -0.37
LIMS1-202ENST00000338045 PRSS47A8MTI9 375 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 L7N2F9 121 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 SERPINE2P07093 398 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 VDAC1P21796 283 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 SSTR2P30874 369 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF134P52741 427 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 RAB32Q13637 225 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF585BQ52M93 769 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 ESCO2Q56NI9 601 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 NMSQ5H8A3 153 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF841Q6ZN19 808 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF439Q8NDP4 499 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 IFI27L2Q9H2X8 130 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 PLEKHF2Q9H8W4 249 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 RPUSD1Q9UJJ7 312 aaKnown RBP12.74□□□□□ -0.37
LIMS1-202ENST00000338045 GAB2Q9UQC2 676 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 CLEC18AA5D8T8 446 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 PCP4L1A6NKN8 68 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 MMP23AO75900 390 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 C4BPBP20851 252 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 RAB7AP51149 207 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 TMEM155Q4W5P6 130 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 UTF1Q5T230 341 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 PRSS54Q6PEW0 395 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF66Q6ZN08 573 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 CLEC18CQ8NCF0 446 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 MFFQ9GZY8 342 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 CHODLQ9H9P2 273 aa12.74□□□□□ -0.37
LIMS1-202ENST00000338045 FAM212BQ9NTI7 297 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-202ENST00000338045 USP9XQ93008 2570 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-202ENST00000338045 TRBV23-1A0A0A0MS06 115 aa12.73□□□□□ -0.37
LIMS1-202ENST00000338045 RNF222A6NCQ9 220 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms