RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 TMEM78Q5T7P6 136 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 ORAI1Q96D31 301 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 FOXF1Q12946 379 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 MEIG1Q5JSS6 88 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 PQLC2Q6ZP29 291 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 OR6X1Q8NH79 312 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 MRGPRX1Q96LB2 322 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 MPC1Q9Y5U8 109 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 NDUFB4O95168 129 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 LCN2P80188 198 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF324BQ6AW86 544 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-201ENST00000335551 METTL26Q96S19 204 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 HDHD3Q9BSH5 251 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-201ENST00000335551 OR51B2Q9Y5P1 312 aa5.43□□□□□ -1.54
CSMD1-201ENST00000335551 H3BRM9 83 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 KIRREL2Q6UWL6 708 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 RNF122Q9H9V4 155 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 STRCQ7RTU9 1775 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 C17orf51A8MQB3 221 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 S1PR2O95136 353 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 SBK3P0C264 359 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 HIKESHIQ53FT3 197 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 LRRC29Q8WV35 223 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 K7EQS6 105 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 OR4X2Q8NGF9 303 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 MRGPRDQ8TDS7 321 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 NDUFAF3Q9BU61 184 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 TICRRQ7Z2Z1 1910 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 F2RL2O00254 374 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 OR4A8P0C604 315 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 OTPQ5XKR4 325 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 ASCL5Q7RTU5 278 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 GVQW1Q8N7I0 195 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF430Q9H8G1 570 aaPredicted RBP5.42□□□□□ -1.54
CSMD1-201ENST00000335551 LOC390937A0A1W2PQ73 354 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 ERVH48-1M5A8F1 160 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 ATP5LO75964 103 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 TM4SF20Q53R12 229 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 DMKNQ6E0U4 476 aaPredicted RBP5.42□□□□□ -1.54
CSMD1-201ENST00000335551 SLC23A3Q6PIS1 610 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 OR4D9Q8NGE8 314 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 OR10J6PQ8NGY7 276 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 DPH3Q96FX2 82 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 SCNM1Q9BWG6 230 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 HCFC1R1Q9NWW0 138 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 DHCR7Q9UBM7 475 aaKnown RBP5.42□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM131Q92545 1883 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 COL16A1Q07092 1604 aaPredicted RBP5.42□□□□□ -1.54
CSMD1-201ENST00000335551 CACNG7P62955 275 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 FBLN7Q53RD9 439 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 GMLQ99445 158 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 TIMP4Q99727 224 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 AHDC1Q5TGY3 1603 aaPredicted RBP5.42□□□□□ -1.54
CSMD1-201ENST00000335551 NHSQ6T4R5 1651 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 TRAV9-1A0A075B6T8 112 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 MRPS11P82912 194 aaKnown RBP5.42□□□□□ -1.54
CSMD1-201ENST00000335551 ASCL4Q6XD76 172 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 PGLYRP4Q96LB8 373 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 CITED1Q99966 193 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 FLRT3Q9NZU0 649 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM202A6NGA9 273 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 ALG1L2C9J202 215 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 PSG9Q00887 426 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF774Q6NX45 483 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 DYNLRB2Q8TF09 96 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 FOXB1Q99853 325 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 C19orf24Q9BVV8 132 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 PLSCR2Q9NRY7 297 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 FAM78AQ5JUQ0 283 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 OR1K1Q8NGR3 316 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 SLC37A2Q8TED4 501 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 HARBI1Q96MB7 349 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 SMIM14Q96QK8 99 aa5.42□□□□□ -1.54
CSMD1-201ENST00000335551 TRGC1P0CF51 173 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ARL14EPLP0DKL9 152 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 INSL4Q14641 139 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 PRICKLE4Q2TBC4 344 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CCSMST1Q4G0I0 132 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 VAX1Q5SQQ9 334 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 LDLRAD1Q5T700 205 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 C17orf99Q6UX52 265 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CITED2Q99967 270 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 MEGF9Q9H1U4 602 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 TBL2Q9Y4P3 447 aaKnown RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 QSER1Q2KHR3 1735 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 TRAV8-4A0A0B4J246 113 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 GAGE2BQ13066 116 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 GAGE2EQ4V326 116 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 LHFPL4Q7Z7J7 247 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CXXC4Q9H2H0 198 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 GAGE2DQ9UEU5 116 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 TRAV38-1A0A0B4J264 116 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 FGF5P12034 268 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CXCL2P19875 107 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 B4GALNT1Q00973 533 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 KCNMB1Q16558 191 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CXorf67Q86X51 503 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 STPG3Q8N7X2 389 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SDHCQ99643 169 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CHST5Q9GZS9 411 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms