RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FAM90A9PA6NNJ1 464 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 EDN3P14138 238 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NUBP1P53384 320 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NUTF2P61970 127 aaKnown RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 RNFT1Q5M7Z0 435 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF324BQ6AW86 544 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 LRRC29Q8WV35 223 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 RGP1Q92546 391 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 TNFRSF12AQ9NP84 129 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 YBX2Q9Y2T7 364 aaKnown RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NDUFB4O95168 129 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 IGHMP01871 453 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 CTAG1AP78358 180 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ZP4Q12836 540 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 CCSMST1Q4G0I0 132 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 C1orf100Q5SVJ3 147 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 LINC01465Q8N7H1 131 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 OR2Z1Q8NG97 314 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 LPAR2Q9HBW0 351 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 KIAA0040Q15053 153 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM177Q53S58 311 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 FAM157BP0CG42 384 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ESDP10768 282 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 RHOGP84095 191 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 PGLYRP3Q96LB9 341 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 METTL26Q96S19 204 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 LIPT2A6NK58 231 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 LYZL2Q7Z4W2 148 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 BOD1L2Q8IYS8 172 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 IL36RNQ9UBH0 155 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 DHCR7Q9UBM7 475 aaKnown RBP4.81□□□□□ -1.64
PTPRB-202ENST00000334414 MEX3AA1L020 520 aaKnown RBP4.81□□□□□ -1.64
PTPRB-202ENST00000334414 J3QR06 171 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 K7N7A8 449 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ANKRD33Q7Z3H0 272 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 GVQW1Q8N7I0 195 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ABHD14AQ9BUJ0 271 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 OR2H1Q9GZK4 316 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 CA6P23280 308 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ANOS1P23352 680 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ACER2Q5QJU3 275 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 COA4Q9NYJ1 87 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 GPR183P32249 361 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM140Q9NV12 185 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 TBC1D29Q9UFV1 150 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ATP23Q9Y6H3 246 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 RND3P61587 244 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF774Q6NX45 483 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 TMEFF1Q8IYR6 380 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ALKBH3Q96Q83 286 aaPredicted RBP4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ZNFX1Q9P2E3 1918 aaKnown RBP4.81□□□□□ -1.64
PTPRB-202ENST00000334414 VSIG10L2P0DP72 767 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.81□□□□□ -1.64
PTPRB-202ENST00000334414 HEXA-AS1Q9H8Q6 139 aa4.81□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF658BQ4V348 819 aaPredicted RBP4.81□□□□□ -1.64
PTPRB-202ENST00000334414 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1W2PPC1 479 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 IZUMO1RA6ND01 250 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 ARL14EPLP0DKL9 152 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 SNAI3Q3KNW1 292 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 H2BFSP57053 126 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 TNFAIP6P98066 277 aaPredicted RBP4.8□□□□□ -1.64
PTPRB-202ENST00000334414 SMAD2Q15796 467 aaKnown RBP4.8□□□□□ -1.64
PTPRB-202ENST00000334414 CEACAM21Q3KPI0 293 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 BHLHA15Q7RTS1 189 aaPredicted RBP4.8□□□□□ -1.64
PTPRB-202ENST00000334414 OR4A5Q8NH83 315 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 HCFC1R1Q9NWW0 138 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 MPZP25189 248 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 ASIPP42127 132 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 C2orf83Q53S99 150 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 OR13H1Q8NG92 308 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 MRGPRFQ96AM1 343 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 FBXO17Q96EF6 278 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 WNT5BQ9H1J7 359 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 CEACAM18A8MTB9 384 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 C8orf88P0DMB2 117 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 GLI4P10075 376 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 CKS1BP61024 79 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 INSL4Q14641 139 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 ZIC1Q15915 447 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 TSPO2Q5TGU0 170 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 TAF1LQ8IZX4 1826 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 VKORC1L1Q8N0U8 176 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 SSMEM1Q8WWF3 244 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 A0A096LPE4 126 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1W2PPZ6 126 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 GAGE1Q13065 139 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 MRGPRDQ8TDS7 321 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 HARBI1Q96MB7 349 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM208Q9BTX3 173 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 COL24A1Q17RW2 1714 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 GNB2P62879 340 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 RPL8P62917 257 aaKnown RBP4.8□□□□□ -1.64
PTPRB-202ENST00000334414 OLIG3Q7RTU3 272 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 SMOC1Q9H4F8 434 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM8BA6NDV4 472 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 CXCL13O43927 109 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms